Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.07■□□□□ 0.64
SHC1P29353 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
SHC1P29353 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.07■□□□□ 0.64
SHC1P29353 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC1P29353 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.07■□□□□ 0.64
SHC1P29353 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.07■□□□□ 0.64
SHC1P29353 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.07■□□□□ 0.64
SHC1P29353 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SHC1P29353 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SHC1P29353 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.07■□□□□ 0.64
SHC1P29353 Z98882.1-201ENST00000622160 2253 ntBASIC19.07■□□□□ 0.64
SHC1P29353 AL157384.1-201ENST00000445995 2473 ntBASIC19.07■□□□□ 0.64
SHC1P29353 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SHC1P29353 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHC1P29353 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SHC1P29353 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SHC1P29353 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SHC1P29353 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SHC1P29353 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SHC1P29353 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.05■□□□□ 0.64
SHC1P29353 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.05■□□□□ 0.64
SHC1P29353 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.05■□□□□ 0.64
SHC1P29353 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SHC1P29353 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.05■□□□□ 0.64
SHC1P29353 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SHC1P29353 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHC1P29353 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.04■□□□□ 0.64
SHC1P29353 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHC1P29353 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.04■□□□□ 0.64
SHC1P29353 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.04■□□□□ 0.64
SHC1P29353 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.04■□□□□ 0.64
SHC1P29353 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SHC1P29353 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.04■□□□□ 0.64
SHC1P29353 AC104564.3-201ENST00000582367 638 ntBASIC19.04■□□□□ 0.64
SHC1P29353 AC053503.5-201ENST00000601508 636 ntBASIC19.04■□□□□ 0.64
SHC1P29353 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHC1P29353 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHC1P29353 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.04■□□□□ 0.64
SHC1P29353 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.04■□□□□ 0.64
SHC1P29353 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.04■□□□□ 0.64
SHC1P29353 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC1P29353 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHC1P29353 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC1P29353 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC1P29353 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.03■□□□□ 0.64
SHC1P29353 FEM1AP4-201ENST00000443167 1987 ntBASIC19.03■□□□□ 0.64
SHC1P29353 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.03■□□□□ 0.64
SHC1P29353 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.03■□□□□ 0.64
SHC1P29353 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.03■□□□□ 0.64
SHC1P29353 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.03■□□□□ 0.64
SHC1P29353 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC1P29353 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHC1P29353 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
SHC1P29353 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms