Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNA3P22001 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KCNA3P22001 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.87■■□□□ 1.73
KCNA3P22001 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNA3P22001 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
KCNA3P22001 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNA3P22001 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KCNA3P22001 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNA3P22001 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.86■■□□□ 1.73
KCNA3P22001 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
KCNA3P22001 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.86■■□□□ 1.73
KCNA3P22001 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.86■■□□□ 1.73
KCNA3P22001 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KCNA3P22001 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KCNA3P22001 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC25.86■■□□□ 1.73
KCNA3P22001 AL023875.1-201ENST00000640777 796 ntBASIC25.86■■□□□ 1.73
KCNA3P22001 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.86■■□□□ 1.73
KCNA3P22001 AC003102.1-202ENST00000563394 1796 ntBASIC25.86■■□□□ 1.73
KCNA3P22001 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.85■■□□□ 1.73
KCNA3P22001 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNA3P22001 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
KCNA3P22001 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
KCNA3P22001 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.85■■□□□ 1.73
KCNA3P22001 MIR4785-201ENST00000585005 73 ntBASIC25.85■■□□□ 1.73
KCNA3P22001 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC25.85■■□□□ 1.73
KCNA3P22001 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KCNA3P22001 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KCNA3P22001 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.85■■□□□ 1.73
KCNA3P22001 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.84■■□□□ 1.73
KCNA3P22001 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.84■■□□□ 1.73
KCNA3P22001 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
KCNA3P22001 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.84■■□□□ 1.73
KCNA3P22001 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.84■■□□□ 1.73
KCNA3P22001 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
KCNA3P22001 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.84■■□□□ 1.73
KCNA3P22001 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.84■■□□□ 1.73
KCNA3P22001 C2orf69P4-201ENST00000565394 541 ntBASIC25.84■■□□□ 1.73
KCNA3P22001 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.84■■□□□ 1.73
KCNA3P22001 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KCNA3P22001 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.84■■□□□ 1.73
KCNA3P22001 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.83■■□□□ 1.73
KCNA3P22001 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
KCNA3P22001 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KCNA3P22001 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.83■■□□□ 1.73
KCNA3P22001 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KCNA3P22001 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
KCNA3P22001 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.83■■□□□ 1.73
KCNA3P22001 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
KCNA3P22001 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.83■■□□□ 1.73
KCNA3P22001 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KCNA3P22001 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
KCNA3P22001 AC087742.1-201ENST00000575880 1738 ntBASIC25.83■■□□□ 1.72
KCNA3P22001 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
KCNA3P22001 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KCNA3P22001 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
KCNA3P22001 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KCNA3P22001 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
KCNA3P22001 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KCNA3P22001 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.82■■□□□ 1.72
KCNA3P22001 AP001412.1-201ENST00000608405 714 ntBASIC25.82■■□□□ 1.72
KCNA3P22001 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.82■■□□□ 1.72
KCNA3P22001 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.82■■□□□ 1.72
KCNA3P22001 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KCNA3P22001 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KCNA3P22001 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.82■■□□□ 1.72
KCNA3P22001 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
KCNA3P22001 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.81■■□□□ 1.72
KCNA3P22001 TMPOP1-202ENST00000424642 1267 ntBASIC25.81■■□□□ 1.72
KCNA3P22001 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.81■■□□□ 1.72
KCNA3P22001 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.81■■□□□ 1.72
KCNA3P22001 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KCNA3P22001 RN7SL850P-201ENST00000579959 291 ntBASIC25.81■■□□□ 1.72
KCNA3P22001 AL353708.3-201ENST00000610272 989 ntBASIC25.81■■□□□ 1.72
KCNA3P22001 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KCNA3P22001 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.81■■□□□ 1.72
KCNA3P22001 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
KCNA3P22001 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KCNA3P22001 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.8■■□□□ 1.72
KCNA3P22001 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
KCNA3P22001 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KCNA3P22001 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KCNA3P22001 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.8■■□□□ 1.72
KCNA3P22001 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
KCNA3P22001 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.8■■□□□ 1.72
KCNA3P22001 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.8■■□□□ 1.72
KCNA3P22001 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
KCNA3P22001 CD177P1-201ENST00000606252 935 ntBASIC25.8■■□□□ 1.72
KCNA3P22001 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
KCNA3P22001 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KCNA3P22001 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
KCNA3P22001 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
KCNA3P22001 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms