Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRFP11831 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.32■■□□□ 1
SRFP11831 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.32■■□□□ 1
SRFP11831 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRFP11831 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SRFP11831 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRFP11831 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRFP11831 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.31■■□□□ 1
SRFP11831 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFP11831 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRFP11831 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFP11831 RPS2P55-201ENST00000397318 883 ntBASIC21.31■■□□□ 1
SRFP11831 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.31■■□□□ 1
SRFP11831 AC107956.1-201ENST00000494359 873 ntBASIC21.31■■□□□ 1
SRFP11831 KRT18P21-201ENST00000515767 1272 ntBASIC21.31■■□□□ 1
SRFP11831 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFP11831 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRFP11831 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SRFP11831 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.31■■□□□ 1
SRFP11831 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.3■■□□□ 1
SRFP11831 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.3■■□□□ 1
SRFP11831 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.3■■□□□ 1
SRFP11831 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SRFP11831 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SRFP11831 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.3■■□□□ 1
SRFP11831 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.3■■□□□ 1
SRFP11831 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.3■■□□□ 1
SRFP11831 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SRFP11831 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.3■■□□□ 1
SRFP11831 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.29■■□□□ 1
SRFP11831 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.29■■□□□ 1
SRFP11831 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.29■■□□□ 1
SRFP11831 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.29■■□□□ 1
SRFP11831 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SRFP11831 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.29■■□□□ 1
SRFP11831 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SRFP11831 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.29■■□□□ 1
SRFP11831 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.29■■□□□ 1
SRFP11831 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.29■■□□□ 1
SRFP11831 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.28■■□□□ 1
SRFP11831 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 CYP21A1P-202ENST00000354927 1481 ntBASIC21.28■■□□□ 1
SRFP11831 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SRFP11831 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SRFP11831 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 TSPY7P-201ENST00000431358 1114 ntBASIC21.28■■□□□ 1
SRFP11831 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.28■■□□□ 1
SRFP11831 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SRFP11831 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.28■■□□□ 1
SRFP11831 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.28■■□□□ 1
SRFP11831 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.28■■□□□ 1
SRFP11831 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.28■■□□□ 1
SRFP11831 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.28■■□□□ 1
SRFP11831 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
SRFP11831 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.28■■□□□ 1
SRFP11831 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SRFP11831 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.27■■□□□ 1
SRFP11831 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SRFP11831 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.27■■□□□ 1
SRFP11831 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.27■■□□□ 1
SRFP11831 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.27■■□□□ 1
SRFP11831 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.27■■□□□ 1
SRFP11831 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRFP11831 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRFP11831 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.27■■□□□ 1
SRFP11831 AP001412.1-201ENST00000608405 714 ntBASIC21.27■■□□□ 1
SRFP11831 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SRFP11831 AC105020.6-201ENST00000621523 1217 ntBASIC21.27■■□□□ 1
SRFP11831 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRFP11831 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRFP11831 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SRFP11831 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SRFP11831 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.26■□□□□ 0.99
SRFP11831 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFP11831 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFP11831 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SRFP11831 MTDHP1-201ENST00000605323 784 ntBASIC21.26■□□□□ 0.99
SRFP11831 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFP11831 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRFP11831 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms