Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD28P10747 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD28P10747 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD28P10747 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD28P10747 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CD28P10747 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD28P10747 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.3■□□□□ 0.2
CD28P10747 RARRES2P4-201ENST00000514074 484 ntBASIC16.3■□□□□ 0.2
CD28P10747 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.3■□□□□ 0.2
CD28P10747 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.3■□□□□ 0.2
CD28P10747 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CD28P10747 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CD28P10747 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.3■□□□□ 0.2
CD28P10747 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD28P10747 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CD28P10747 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD28P10747 AC010980.2-201ENST00000587099 1412 ntBASIC16.29■□□□□ 0.2
CD28P10747 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.29■□□□□ 0.2
CD28P10747 AC127496.7-201ENST00000625110 1798 ntBASIC16.29■□□□□ 0.2
CD28P10747 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD28P10747 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD28P10747 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD28P10747 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD28P10747 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.29■□□□□ 0.2
CD28P10747 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.29■□□□□ 0.2
CD28P10747 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.29■□□□□ 0.2
CD28P10747 AL162412.1-201ENST00000567129 965 ntBASIC16.29■□□□□ 0.2
CD28P10747 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.29■□□□□ 0.2
CD28P10747 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.29■□□□□ 0.2
CD28P10747 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD28P10747 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CD28P10747 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.29■□□□□ 0.2
CD28P10747 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD28P10747 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CD28P10747 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.29■□□□□ 0.2
CD28P10747 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD28P10747 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD28P10747 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.28■□□□□ 0.2
CD28P10747 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CD28P10747 AC010542.4-201ENST00000563151 1910 ntBASIC16.28■□□□□ 0.2
CD28P10747 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD28P10747 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.28■□□□□ 0.2
CD28P10747 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.28■□□□□ 0.2
CD28P10747 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.28■□□□□ 0.2
CD28P10747 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CD28P10747 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD28P10747 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD28P10747 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CD28P10747 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.28■□□□□ 0.2
CD28P10747 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD28P10747 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
CD28P10747 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CD28P10747 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD28P10747 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD28P10747 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.27■□□□□ 0.2
CD28P10747 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CD28P10747 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD28P10747 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.27■□□□□ 0.2
CD28P10747 POU5F1P3-201ENST00000428824 1078 ntBASIC16.27■□□□□ 0.2
CD28P10747 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CD28P10747 AC097658.1-201ENST00000475555 843 ntBASIC16.27■□□□□ 0.2
CD28P10747 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.27■□□□□ 0.2
CD28P10747 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.27■□□□□ 0.2
CD28P10747 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.27■□□□□ 0.2
CD28P10747 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.27■□□□□ 0.2
CD28P10747 AC066615.1-201ENST00000640911 628 ntBASIC16.27■□□□□ 0.2
CD28P10747 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD28P10747 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD28P10747 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD28P10747 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.27■□□□□ 0.19
CD28P10747 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.26■□□□□ 0.19
CD28P10747 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.26■□□□□ 0.19
CD28P10747 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD28P10747 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.26■□□□□ 0.19
CD28P10747 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.26■□□□□ 0.19
CD28P10747 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.26■□□□□ 0.19
CD28P10747 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.26■□□□□ 0.19
CD28P10747 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.26■□□□□ 0.19
CD28P10747 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 AC083880.1-201ENST00000608266 535 ntBASIC16.26■□□□□ 0.19
CD28P10747 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CD28P10747 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.26■□□□□ 0.19
CD28P10747 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.26■□□□□ 0.19
CD28P10747 C11orf96-202ENST00000528572 1834 ntBASIC16.26■□□□□ 0.19
CD28P10747 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD28P10747 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CD28P10747 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.25■□□□□ 0.19
CD28P10747 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD28P10747 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD28P10747 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CD28P10747 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms