Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 GIS1YDR096W 2685 nt1.83□□□□□ -2.12
RPL40BP0CH09 RTS3YGR161C 792 nt1.83□□□□□ -2.12
RPL40BP0CH09 PHS1YJL097W 654 nt1.83□□□□□ -2.12
RPL40BP0CH09 RMP1YLR145W 606 nt1.83□□□□□ -2.12
RPL40BP0CH09 snR11snR11 258 nt1.83□□□□□ -2.12
RPL40BP0CH09 ITT1YML068W 1395 nt1.83□□□□□ -2.12
RPL40BP0CH09 SCL1YGL011C 759 nt1.82□□□□□ -2.12
RPL40BP0CH09 RSM26YJR101W 801 nt1.82□□□□□ -2.12
RPL40BP0CH09 ARC19YKL013C 516 nt1.82□□□□□ -2.12
RPL40BP0CH09 PDR17YNL264C 1053 nt1.82□□□□□ -2.12
RPL40BP0CH09 SVS1YPL163C 783 nt1.82□□□□□ -2.12
RPL40BP0CH09 POL30YBR088C 777 nt1.82□□□□□ -2.12
RPL40BP0CH09 AMS1YGL156W 3252 nt1.81□□□□□ -2.12
RPL40BP0CH09 YDL118WYDL118W 381 nt1.81□□□□□ -2.12
RPL40BP0CH09 YFL041W-AYFL041W-A 192 nt1.81□□□□□ -2.12
RPL40BP0CH09 MED11YMR112C 396 nt1.81□□□□□ -2.12
RPL40BP0CH09 YIM2YMR151W 438 nt1.81□□□□□ -2.12
RPL40BP0CH09 YNL144W-AYNL144W-A 84 nt1.81□□□□□ -2.12
RPL40BP0CH09 ARO7YPR060C 771 nt1.81□□□□□ -2.12
RPL40BP0CH09 RED1YLR263W 2484 nt1.81□□□□□ -2.12
RPL40BP0CH09 PIN4YBL051C 2007 nt1.81□□□□□ -2.12
RPL40BP0CH09 PBI1YPL272C 1554 nt1.81□□□□□ -2.12
RPL40BP0CH09 FKS1YLR342W 5631 nt1.8□□□□□ -2.12
RPL40BP0CH09 DOT6YER088C 2013 nt1.8□□□□□ -2.12
RPL40BP0CH09 YDL050CYDL050C 372 nt1.8□□□□□ -2.12
RPL40BP0CH09 VMA5YKL080W 1179 nt1.8□□□□□ -2.12
RPL40BP0CH09 MF(ALPHA)1YPL187W 498 nt1.8□□□□□ -2.12
RPL40BP0CH09 YOR093CYOR093C 4947 nt1.8□□□□□ -2.12
RPL40BP0CH09 YMR1YJR110W 2067 nt1.79□□□□□ -2.12
RPL40BP0CH09 GCN2YDR283C 4980 nt1.79□□□□□ -2.12
RPL40BP0CH09 MAK5YBR142W 2322 nt1.79□□□□□ -2.12
RPL40BP0CH09 YBT1YLL048C 4986 nt1.79□□□□□ -2.12
RPL40BP0CH09 NCB2YDR397C 441 nt1.79□□□□□ -2.12
RPL40BP0CH09 AIM19YIL087C 474 nt1.79□□□□□ -2.12
RPL40BP0CH09 YKL156C-AYKL156C-A 117 nt1.79□□□□□ -2.12
RPL40BP0CH09 YLL047WYLL047W 384 nt1.79□□□□□ -2.12
RPL40BP0CH09 CDC123YLR215C 1083 nt1.79□□□□□ -2.12
RPL40BP0CH09 YOR062CYOR062C 807 nt1.79□□□□□ -2.12
RPL40BP0CH09 UAF30YOR295W 687 nt1.79□□□□□ -2.12
RPL40BP0CH09 MEI5YPL121C 669 nt1.79□□□□□ -2.12
RPL40BP0CH09 CBP6YBR120C 489 nt1.79□□□□□ -2.12
RPL40BP0CH09 YNL011CYNL011C 1335 nt1.79□□□□□ -2.12
RPL40BP0CH09 YJL016WYJL016W 1686 nt1.79□□□□□ -2.12
RPL40BP0CH09 FYV8YGR196C 2454 nt1.79□□□□□ -2.12
RPL40BP0CH09 SYH1YPL105C 2550 nt1.79□□□□□ -2.12
RPL40BP0CH09 PLC1YPL268W 2610 nt1.79□□□□□ -2.12
RPL40BP0CH09 HER1YOR227W 3741 nt1.78□□□□□ -2.12
RPL40BP0CH09 RRP12YPL012W 3687 nt1.78□□□□□ -2.12
RPL40BP0CH09 AVT2YEL064C 1443 nt1.78□□□□□ -2.12
RPL40BP0CH09 MRP10YDL045W-A 288 nt1.78□□□□□ -2.12
RPL40BP0CH09 EMC2YJR088C 879 nt1.78□□□□□ -2.12
RPL40BP0CH09 SPC3YLR066W 555 nt1.78□□□□□ -2.12
RPL40BP0CH09 RPS29AYLR388W 171 nt1.78□□□□□ -2.12
RPL40BP0CH09 RPS1AYLR441C 768 nt1.78□□□□□ -2.12
RPL40BP0CH09 YBL012CYBL012C 402 nt1.78□□□□□ -2.12
RPL40BP0CH09 YBL081WYBL081W 1107 nt1.78□□□□□ -2.12
RPL40BP0CH09 YOL134CYOL134C 390 nt1.78□□□□□ -2.12
RPL40BP0CH09 YOL166CYOL166C 339 nt1.78□□□□□ -2.12
RPL40BP0CH09 HAP4YKL109W 1665 nt1.77□□□□□ -2.13
RPL40BP0CH09 DNF3YMR162C 4971 nt1.77□□□□□ -2.13
RPL40BP0CH09 ART10YLR392C 1557 nt1.77□□□□□ -2.13
RPL40BP0CH09 21S_rRNA21S_rRNA 3296 nt1.77□□□□□ -2.13
RPL40BP0CH09 RDS2YPL133C 1341 nt1.77□□□□□ -2.13
RPL40BP0CH09 APL2YKL135C 2181 nt1.77□□□□□ -2.13
RPL40BP0CH09 YGR111WYGR111W 1203 nt1.77□□□□□ -2.13
RPL40BP0CH09 OTU2YHL013C 924 nt1.77□□□□□ -2.13
RPL40BP0CH09 YNL043CYNL043C 321 nt1.77□□□□□ -2.13
RPL40BP0CH09 YBL077WYBL077W 432 nt1.77□□□□□ -2.13
RPL40BP0CH09 ESF2YNR054C 951 nt1.77□□□□□ -2.13
RPL40BP0CH09 TSR4YOL022C 1227 nt1.77□□□□□ -2.13
RPL40BP0CH09 THI80YOR143C 960 nt1.77□□□□□ -2.13
RPL40BP0CH09 SPS4YOR313C 1017 nt1.77□□□□□ -2.13
RPL40BP0CH09 YBR090CYBR090C 369 nt1.77□□□□□ -2.13
RPL40BP0CH09 CLU1YMR012W 3834 nt1.77□□□□□ -2.13
RPL40BP0CH09 MSS4YDR208W 2340 nt1.77□□□□□ -2.13
RPL40BP0CH09 YOR365CYOR365C 2112 nt1.76□□□□□ -2.13
RPL40BP0CH09 SWA2YDR320C 2007 nt1.76□□□□□ -2.13
RPL40BP0CH09 CFT2YLR115W 2580 nt1.76□□□□□ -2.13
RPL40BP0CH09 FIG2YCR089W 4830 nt1.76□□□□□ -2.13
RPL40BP0CH09 SKO1YNL167C 1944 nt1.76□□□□□ -2.13
RPL40BP0CH09 VPS35YJL154C 2835 nt1.76□□□□□ -2.13
RPL40BP0CH09 RRF1YHR038W 693 nt1.76□□□□□ -2.13
RPL40BP0CH09 YHC1YLR298C 696 nt1.76□□□□□ -2.13
RPL40BP0CH09 YLR402WYLR402W 192 nt1.76□□□□□ -2.13
RPL40BP0CH09 VMA6YLR447C 1038 nt1.76□□□□□ -2.13
RPL40BP0CH09 YMR272W-BYMR272W-B 108 nt1.76□□□□□ -2.13
RPL40BP0CH09 TRM7YBR061C 933 nt1.76□□□□□ -2.13
RPL40BP0CH09 CHS1YNL192W 3396 nt1.76□□□□□ -2.13
RPL40BP0CH09 USO1YDL058W 5373 nt1.76□□□□□ -2.13
RPL40BP0CH09 UBX3YDL091C 1368 nt1.75□□□□□ -2.13
RPL40BP0CH09 HTA1YDR225W 399 nt1.75□□□□□ -2.13
RPL40BP0CH09 YHR071C-AYHR071C-A 321 nt1.75□□□□□ -2.13
RPL40BP0CH09 RPC17YJL011C 486 nt1.75□□□□□ -2.13
RPL40BP0CH09 ECM13YBL043W 774 nt1.75□□□□□ -2.13
RPL40BP0CH09 MRPL17YNL252C 846 nt1.75□□□□□ -2.13
RPL40BP0CH09 LTO1YNL260C 597 nt1.75□□□□□ -2.13
RPL40BP0CH09 RGA1YOR127W 3024 nt1.75□□□□□ -2.13
RPL40BP0CH09 FIR1YER032W 2631 nt1.75□□□□□ -2.13
RPL40BP0CH09 SKI3YPR189W 4299 nt1.75□□□□□ -2.13
RPL40BP0CH09 YGR130CYGR130C 2451 nt1.75□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms