Protein–RNA interactions for Protein: P0C2I6

TY1B-LR3, Transposon Ty1-LR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-LR3P0C2I6 tF(GAA)FtF(GAA)F 73 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 tF(GAA)GtF(GAA)G 73 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 tF(GAA)H1tF(GAA)H1 73 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 tF(GAA)H2tF(GAA)H2 73 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 tF(GAA)MtF(GAA)M 73 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 tF(GAA)P1tF(GAA)P1 73 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 tF(GAA)P2tF(GAA)P2 73 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 MMS22YLR320W 4365 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 SMP3YOR149C 1551 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 VPS38YLR360W 1320 nt1.94□□□□□ -2.1
TY1B-LR3P0C2I6 MRE11YMR224C 2079 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 PET100YDR079W 336 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 EAF7YNL136W 1278 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 IST1YNL265C 897 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 CTM1YHR109W 1758 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 VPS15YBR097W 4365 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 YJR061WYJR061W 2808 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 AAR2YBL074C 1068 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 CRS5YOR031W 210 nt1.93□□□□□ -2.1
TY1B-LR3P0C2I6 HOP1YIL072W 1818 nt1.92□□□□□ -2.1
TY1B-LR3P0C2I6 NPL4YBR170C 1743 nt1.92□□□□□ -2.1
TY1B-LR3P0C2I6 MCM21YDR318W 1107 nt1.92□□□□□ -2.1
TY1B-LR3P0C2I6 FRQ1YDR373W 573 nt1.92□□□□□ -2.1
TY1B-LR3P0C2I6 MBA1YBR185C 837 nt1.92□□□□□ -2.1
TY1B-LR3P0C2I6 RLI1YDR091C 1827 nt1.92□□□□□ -2.1
TY1B-LR3P0C2I6 DSE4YNR067C 3354 nt1.91□□□□□ -2.1
TY1B-LR3P0C2I6 RRF1YHR038W 693 nt1.91□□□□□ -2.1
TY1B-LR3P0C2I6 CYC2YOR037W 1101 nt1.91□□□□□ -2.1
TY1B-LR3P0C2I6 YHR214C-CYHR214C-C 1437 nt1.91□□□□□ -2.1
TY1B-LR3P0C2I6 CNM67YNL225C 1746 nt1.91□□□□□ -2.1
TY1B-LR3P0C2I6 YCK2YNL154C 1641 nt1.9□□□□□ -2.1
TY1B-LR3P0C2I6 EST3YIL009C-A 546 nt1.9□□□□□ -2.1
TY1B-LR3P0C2I6 YOL166CYOL166C 339 nt1.9□□□□□ -2.1
TY1B-LR3P0C2I6 YRR1YOR162C 2433 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 NDC80YIL144W 2076 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 MRPL9YGR220C 810 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 COS6YGR295C 1146 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 YIL156W-AYIL156W-A 402 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 RMP1YLR145W 606 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 MRPL27YBR282W 441 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 GRX1YCL035C 333 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 SEC15YGL233W 2733 nt1.9□□□□□ -2.11
TY1B-LR3P0C2I6 OCT1YKL134C 2319 nt1.89□□□□□ -2.11
TY1B-LR3P0C2I6 SOK1YDR006C 2706 nt1.89□□□□□ -2.11
TY1B-LR3P0C2I6 ISW2YOR304W 3363 nt1.89□□□□□ -2.11
TY1B-LR3P0C2I6 YCK3YER123W 1575 nt1.89□□□□□ -2.11
TY1B-LR3P0C2I6 VPH2YKL119C 648 nt1.89□□□□□ -2.11
TY1B-LR3P0C2I6 ESF2YNR054C 951 nt1.89□□□□□ -2.11
TY1B-LR3P0C2I6 PLP1YDR183W 693 nt1.88□□□□□ -2.11
TY1B-LR3P0C2I6 DCG1YIR030C 735 nt1.88□□□□□ -2.11
TY1B-LR3P0C2I6 YGR237CYGR237C 2358 nt1.88□□□□□ -2.11
TY1B-LR3P0C2I6 RDS2YPL133C 1341 nt1.88□□□□□ -2.11
TY1B-LR3P0C2I6 SIP4YJL089W 2490 nt1.88□□□□□ -2.11
TY1B-LR3P0C2I6 MSN5YDR335W 3675 nt1.88□□□□□ -2.11
TY1B-LR3P0C2I6 UBC6YER100W 753 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 RPS29AYLR388W 171 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 REG1YDR028C 3045 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 PKH3YDR466W 2697 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 STP1YDR463W 1560 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 DBP5YOR046C 1449 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 SPS2YDR522C 1509 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 SPH1YLR313C 1593 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 MIC60YKR016W 1623 nt1.87□□□□□ -2.11
TY1B-LR3P0C2I6 ARG2YJL071W 1725 nt1.86□□□□□ -2.11
TY1B-LR3P0C2I6 ATP25YMR098C 1839 nt1.86□□□□□ -2.11
TY1B-LR3P0C2I6 YCR087C-AYCR087C-A 462 nt1.86□□□□□ -2.11
TY1B-LR3P0C2I6 YOR029WYOR029W 336 nt1.86□□□□□ -2.11
TY1B-LR3P0C2I6 ARP10YDR106W 855 nt1.85□□□□□ -2.11
TY1B-LR3P0C2I6 IRC21YMR073C 606 nt1.85□□□□□ -2.11
TY1B-LR3P0C2I6 AEP2YMR282C 1743 nt1.85□□□□□ -2.11
TY1B-LR3P0C2I6 INP51YIL002C 2841 nt1.85□□□□□ -2.11
TY1B-LR3P0C2I6 YJR003CYJR003C 1560 nt1.85□□□□□ -2.11
TY1B-LR3P0C2I6 CDC53YDL132W 2448 nt1.85□□□□□ -2.11
TY1B-LR3P0C2I6 RNA1YMR235C 1224 nt1.85□□□□□ -2.11
TY1B-LR3P0C2I6 TCM62YBR044C 1719 nt1.84□□□□□ -2.11
TY1B-LR3P0C2I6 CIK1YMR198W 1785 nt1.84□□□□□ -2.11
TY1B-LR3P0C2I6 FYV8YGR196C 2454 nt1.84□□□□□ -2.12
TY1B-LR3P0C2I6 SHE2YKL130C 741 nt1.84□□□□□ -2.12
TY1B-LR3P0C2I6 AFI1YOR129C 2682 nt1.84□□□□□ -2.12
TY1B-LR3P0C2I6 YDR179W-AYDR179W-A 1392 nt1.84□□□□□ -2.12
TY1B-LR3P0C2I6 YER067C-AYER067C-A 324 nt1.83□□□□□ -2.12
TY1B-LR3P0C2I6 BUR6YER159C 429 nt1.83□□□□□ -2.12
TY1B-LR3P0C2I6 YBR089WYBR089W 600 nt1.83□□□□□ -2.12
TY1B-LR3P0C2I6 KCS1YDR017C 3153 nt1.83□□□□□ -2.12
TY1B-LR3P0C2I6 YDL073WYDL073W 2955 nt1.83□□□□□ -2.12
TY1B-LR3P0C2I6 PRM2YIL037C 1971 nt1.83□□□□□ -2.12
TY1B-LR3P0C2I6 DDI2YFL061W 678 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 CTP1YBR291C 900 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 YFL002W-AYFL002W-A 5313 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 YGR161W-BYGR161W-B 5313 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 YCL019WYCL019W 5313 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 SPP382YLR424W 2127 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 UBR1YGR184C 5853 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 QCR9YGR183C 201 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 RPL33BYOR234C 324 nt1.82□□□□□ -2.12
TY1B-LR3P0C2I6 YLR035C-AYLR035C-A 3468 nt1.81□□□□□ -2.12
TY1B-LR3P0C2I6 SPO22YIL073C 2928 nt1.81□□□□□ -2.12
TY1B-LR3P0C2I6 ZRG17YNR039C 1818 nt1.81□□□□□ -2.12
TY1B-LR3P0C2I6 RPN9YDR427W 1182 nt1.81□□□□□ -2.12
TY1B-LR3P0C2I6 YER023C-AYER023C-A 213 nt1.81□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms