Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.26■□□□□ 0.67
NKX2-2O95096 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NKX2-2O95096 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.26■□□□□ 0.67
NKX2-2O95096 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NKX2-2O95096 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-2O95096 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NKX2-2O95096 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.25■□□□□ 0.67
NKX2-2O95096 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NKX2-2O95096 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.25■□□□□ 0.67
NKX2-2O95096 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.25■□□□□ 0.67
NKX2-2O95096 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX2-2O95096 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.25■□□□□ 0.67
NKX2-2O95096 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX2-2O95096 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 AC121338.2-201ENST00000622535 1744 ntBASIC19.25■□□□□ 0.67
NKX2-2O95096 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX2-2O95096 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-2O95096 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.24■□□□□ 0.67
NKX2-2O95096 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.24■□□□□ 0.67
NKX2-2O95096 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.24■□□□□ 0.67
NKX2-2O95096 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
NKX2-2O95096 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-2O95096 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 PLK5-205ENST00000642079 1969 ntBASIC19.24■□□□□ 0.67
NKX2-2O95096 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-2O95096 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-2O95096 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX2-2O95096 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NKX2-2O95096 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-2O95096 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.23■□□□□ 0.67
NKX2-2O95096 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.23■□□□□ 0.67
NKX2-2O95096 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-2O95096 UBE2DNL-204ENST00000602536 740 ntBASIC19.23■□□□□ 0.67
NKX2-2O95096 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NKX2-2O95096 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-2O95096 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
NKX2-2O95096 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
NKX2-2O95096 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-2O95096 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-2O95096 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX2-2O95096 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-2O95096 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NKX2-2O95096 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-2O95096 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.22■□□□□ 0.67
NKX2-2O95096 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.22■□□□□ 0.67
NKX2-2O95096 AC243732.1-201ENST00000612648 864 ntBASIC19.22■□□□□ 0.67
NKX2-2O95096 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-2O95096 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-2O95096 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-2O95096 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-2O95096 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NKX2-2O95096 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-2O95096 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-2O95096 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-2O95096 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 AC006128.1-201ENST00000624704 1661 ntBASIC19.21■□□□□ 0.67
NKX2-2O95096 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 PKD1P6-201ENST00000343738 4769 ntBASIC19.21■□□□□ 0.67
NKX2-2O95096 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-2O95096 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.21■□□□□ 0.67
NKX2-2O95096 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-2O95096 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms