Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF11O60813 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF11O60813 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF11O60813 AC007375.3-201ENST00000600936 2314 ntBASIC21.23■□□□□ 0.99
PRAMEF11O60813 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF11O60813 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
PRAMEF11O60813 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF11O60813 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF11O60813 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PRAMEF11O60813 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.22■□□□□ 0.99
PRAMEF11O60813 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.22■□□□□ 0.99
PRAMEF11O60813 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.22■□□□□ 0.99
PRAMEF11O60813 AL049796.1-201ENST00000565336 1766 ntBASIC21.22■□□□□ 0.99
PRAMEF11O60813 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRAMEF11O60813 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF11O60813 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF11O60813 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF11O60813 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF11O60813 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF11O60813 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF11O60813 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAMEF11O60813 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
PRAMEF11O60813 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.2■□□□□ 0.99
PRAMEF11O60813 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF11O60813 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 AF106564.1-201ENST00000607058 2553 ntBASIC21.2■□□□□ 0.98
PRAMEF11O60813 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF11O60813 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF11O60813 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRAMEF11O60813 AC013268.1-206ENST00000638368 961 ntBASIC21.2■□□□□ 0.98
PRAMEF11O60813 AC112229.1-201ENST00000639295 961 ntBASIC21.2■□□□□ 0.98
PRAMEF11O60813 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF11O60813 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAMEF11O60813 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAMEF11O60813 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF11O60813 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF11O60813 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PRAMEF11O60813 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF11O60813 CNN2P6-201ENST00000439038 900 ntBASIC21.19■□□□□ 0.98
PRAMEF11O60813 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF11O60813 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEF11O60813 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.19■□□□□ 0.98
PRAMEF11O60813 AC073111.5-205ENST00000641717 521 ntBASIC21.19■□□□□ 0.98
PRAMEF11O60813 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
PRAMEF11O60813 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF11O60813 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEF11O60813 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF11O60813 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF11O60813 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF11O60813 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 AC091799.1-201ENST00000422823 811 ntBASIC21.18■□□□□ 0.98
PRAMEF11O60813 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 AC007322.4-201ENST00000509611 723 ntBASIC21.18■□□□□ 0.98
PRAMEF11O60813 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF11O60813 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRAMEF11O60813 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF11O60813 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF11O60813 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PRAMEF11O60813 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.17■□□□□ 0.98
PRAMEF11O60813 CDCA4P2-201ENST00000441182 718 ntBASIC21.17■□□□□ 0.98
PRAMEF11O60813 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.17■□□□□ 0.98
PRAMEF11O60813 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.17■□□□□ 0.98
PRAMEF11O60813 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 AC231657.2-201ENST00000624556 255 ntBASIC21.17■□□□□ 0.98
PRAMEF11O60813 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.17■□□□□ 0.98
PRAMEF11O60813 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRAMEF11O60813 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF11O60813 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF11O60813 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF11O60813 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF11O60813 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF11O60813 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms