Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 AC026271.2-201ENST00000428091 497 ntBASIC20.09■□□□□ 0.81
PRAMEF4O60810 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF4O60810 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.09■□□□□ 0.81
PRAMEF4O60810 AC008175.2-201ENST00000612840 297 ntBASIC20.09■□□□□ 0.81
PRAMEF4O60810 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PRAMEF4O60810 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
PRAMEF4O60810 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
PRAMEF4O60810 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF4O60810 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF4O60810 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 AL157384.1-201ENST00000445995 2473 ntBASIC20.08■□□□□ 0.81
PRAMEF4O60810 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF4O60810 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF4O60810 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRAMEF4O60810 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 RARRES2P11-201ENST00000635158 484 ntBASIC20.08■□□□□ 0.81
PRAMEF4O60810 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PRAMEF4O60810 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PRAMEF4O60810 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRAMEF4O60810 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PRAMEF4O60810 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.07■□□□□ 0.8
PRAMEF4O60810 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEF4O60810 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.07■□□□□ 0.8
PRAMEF4O60810 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEF4O60810 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEF4O60810 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.07■□□□□ 0.8
PRAMEF4O60810 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PRAMEF4O60810 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRAMEF4O60810 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PRAMEF4O60810 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.06■□□□□ 0.8
PRAMEF4O60810 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PRAMEF4O60810 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PRAMEF4O60810 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.06■□□□□ 0.8
PRAMEF4O60810 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PRAMEF4O60810 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.06■□□□□ 0.8
PRAMEF4O60810 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRAMEF4O60810 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEF4O60810 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF4O60810 AC121338.2-201ENST00000622535 1744 ntBASIC20.05■□□□□ 0.8
PRAMEF4O60810 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 AC019069.1-201ENST00000610008 1333 ntBASIC20.04■□□□□ 0.8
PRAMEF4O60810 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 KRT16P2-201ENST00000414673 1423 ntBASIC20.04■□□□□ 0.8
PRAMEF4O60810 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.04■□□□□ 0.8
PRAMEF4O60810 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF4O60810 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms