Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CCNT1O60563 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCNT1O60563 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNT1O60563 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.71■■□□□ 1.39
CCNT1O60563 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCNT1O60563 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.71■■□□□ 1.39
CCNT1O60563 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCNT1O60563 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
CCNT1O60563 AL049796.1-201ENST00000565336 1766 ntBASIC23.7■■□□□ 1.39
CCNT1O60563 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CCNT1O60563 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.38
CCNT1O60563 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNT1O60563 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.7■■□□□ 1.38
CCNT1O60563 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNT1O60563 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
CCNT1O60563 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.7■■□□□ 1.38
CCNT1O60563 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.7■■□□□ 1.38
CCNT1O60563 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.7■■□□□ 1.38
CCNT1O60563 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCNT1O60563 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCNT1O60563 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCNT1O60563 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
CCNT1O60563 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNT1O60563 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNT1O60563 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNT1O60563 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.69■■□□□ 1.38
CCNT1O60563 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CCNT1O60563 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNT1O60563 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCNT1O60563 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.68■■□□□ 1.38
CCNT1O60563 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNT1O60563 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCNT1O60563 RARRES2P11-201ENST00000635158 484 ntBASIC23.68■■□□□ 1.38
CCNT1O60563 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNT1O60563 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.68■■□□□ 1.38
CCNT1O60563 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNT1O60563 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
CCNT1O60563 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNT1O60563 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCNT1O60563 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCNT1O60563 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNT1O60563 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CCNT1O60563 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.67■■□□□ 1.38
CCNT1O60563 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCNT1O60563 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.67■■□□□ 1.38
CCNT1O60563 MFSD11-216ENST00000590393 1141 ntBASIC23.67■■□□□ 1.38
CCNT1O60563 AC092666.2-201ENST00000613287 246 ntBASIC23.67■■□□□ 1.38
CCNT1O60563 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.67■■□□□ 1.38
CCNT1O60563 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.67■■□□□ 1.38
CCNT1O60563 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCNT1O60563 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCNT1O60563 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCNT1O60563 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.66■■□□□ 1.38
CCNT1O60563 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.66■■□□□ 1.38
CCNT1O60563 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.66■■□□□ 1.38
CCNT1O60563 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.66■■□□□ 1.38
CCNT1O60563 AC004911.1-201ENST00000416316 871 ntBASIC23.66■■□□□ 1.38
CCNT1O60563 AC245052.3-201ENST00000450182 901 ntBASIC23.66■■□□□ 1.38
CCNT1O60563 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCNT1O60563 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCNT1O60563 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.66■■□□□ 1.38
CCNT1O60563 AL137784.2-201ENST00000607332 1000 ntBASIC23.66■■□□□ 1.38
CCNT1O60563 AC011767.1-201ENST00000617410 1153 ntBASIC23.66■■□□□ 1.38
CCNT1O60563 BID-214ENST00000617586 542 ntTSL 5 BASIC23.66■■□□□ 1.38
CCNT1O60563 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.66■■□□□ 1.38
CCNT1O60563 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCNT1O60563 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
CCNT1O60563 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCNT1O60563 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCNT1O60563 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CCNT1O60563 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.65■■□□□ 1.38
CCNT1O60563 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.65■■□□□ 1.38
CCNT1O60563 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNT1O60563 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.65■■□□□ 1.38
CCNT1O60563 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.65■■□□□ 1.38
CCNT1O60563 AC010536.3-201ENST00000620306 533 ntBASIC23.65■■□□□ 1.38
CCNT1O60563 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNT1O60563 RBM17P2-201ENST00000616397 1405 ntBASIC23.65■■□□□ 1.38
CCNT1O60563 PKD1P6-201ENST00000343738 4769 ntBASIC23.65■■□□□ 1.38
CCNT1O60563 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCNT1O60563 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCNT1O60563 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.64■■□□□ 1.38
CCNT1O60563 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.64■■□□□ 1.38
CCNT1O60563 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.38
CCNT1O60563 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.64■■□□□ 1.38
CCNT1O60563 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNT1O60563 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNT1O60563 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNT1O60563 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNT1O60563 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
CCNT1O60563 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.64■■□□□ 1.37
CCNT1O60563 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CCNT1O60563 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.64■■□□□ 1.37
CCNT1O60563 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.64■■□□□ 1.37
CCNT1O60563 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.64■■□□□ 1.37
CCNT1O60563 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CCNT1O60563 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CCNT1O60563 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.63■■□□□ 1.37
CCNT1O60563 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CCNT1O60563 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms