Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
LRRTM2O43300 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 SLC29A4P1-201ENST00000398760 971 ntBASIC19.42■□□□□ 0.7
LRRTM2O43300 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM2O43300 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRTM2O43300 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM2O43300 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 AC005181.1-201ENST00000604782 1256 ntBASIC19.42■□□□□ 0.7
LRRTM2O43300 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM2O43300 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRTM2O43300 AF106564.1-201ENST00000607058 2553 ntBASIC19.42■□□□□ 0.7
LRRTM2O43300 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM2O43300 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM2O43300 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LRRTM2O43300 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRTM2O43300 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM2O43300 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRTM2O43300 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
LRRTM2O43300 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRTM2O43300 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LRRTM2O43300 FAM201B-201ENST00000458407 597 ntBASIC19.41■□□□□ 0.7
LRRTM2O43300 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.41■□□□□ 0.7
LRRTM2O43300 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRTM2O43300 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRTM2O43300 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRTM2O43300 AL138781.1-201ENST00000566567 1274 ntBASIC19.41■□□□□ 0.7
LRRTM2O43300 AC104187.1-201ENST00000607510 612 ntBASIC19.41■□□□□ 0.7
LRRTM2O43300 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LRRTM2O43300 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LRRTM2O43300 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRTM2O43300 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRTM2O43300 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 AL157384.1-201ENST00000445995 2473 ntBASIC19.41■□□□□ 0.7
LRRTM2O43300 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRTM2O43300 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRTM2O43300 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.4■□□□□ 0.7
LRRTM2O43300 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRTM2O43300 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRTM2O43300 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRTM2O43300 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRRTM2O43300 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRRTM2O43300 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRTM2O43300 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
LRRTM2O43300 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.39■□□□□ 0.7
LRRTM2O43300 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM2O43300 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LRRTM2O43300 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRTM2O43300 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LRRTM2O43300 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 GUSBP6-202ENST00000438529 1198 ntBASIC19.39■□□□□ 0.69
LRRTM2O43300 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM2O43300 SLC7A5P2-201ENST00000553010 536 ntBASIC19.39■□□□□ 0.69
LRRTM2O43300 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRTM2O43300 MIR4651-201ENST00000582622 73 ntBASIC19.39■□□□□ 0.69
LRRTM2O43300 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRTM2O43300 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LRRTM2O43300 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRTM2O43300 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM2O43300 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRTM2O43300 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRTM2O43300 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM2O43300 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM2O43300 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRTM2O43300 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
LRRTM2O43300 OXCT2P1-201ENST00000447263 1535 ntBASIC19.38■□□□□ 0.69
LRRTM2O43300 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRTM2O43300 DUX4L16-201ENST00000555130 1264 ntBASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms