Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPTLC1O15269 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.37■■□□□ 1.17
SPTLC1O15269 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SPTLC1O15269 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 AC091799.1-201ENST00000422823 811 ntBASIC22.36■■□□□ 1.17
SPTLC1O15269 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
SPTLC1O15269 AC105036.2-201ENST00000569468 176 ntBASIC22.36■■□□□ 1.17
SPTLC1O15269 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.36■■□□□ 1.17
SPTLC1O15269 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.36■■□□□ 1.17
SPTLC1O15269 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPTLC1O15269 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.35■■□□□ 1.17
SPTLC1O15269 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 AC093787.1-201ENST00000450396 207 ntBASIC22.35■■□□□ 1.17
SPTLC1O15269 AF201337.1-201ENST00000520239 748 ntBASIC22.35■■□□□ 1.17
SPTLC1O15269 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPTLC1O15269 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.34■■□□□ 1.17
SPTLC1O15269 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPTLC1O15269 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SPTLC1O15269 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SPTLC1O15269 TSPY20P-201ENST00000450910 630 ntBASIC22.34■■□□□ 1.17
SPTLC1O15269 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SPTLC1O15269 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.34■■□□□ 1.17
SPTLC1O15269 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.34■■□□□ 1.17
SPTLC1O15269 AL591742.1-201ENST00000604433 565 ntBASIC22.34■■□□□ 1.17
SPTLC1O15269 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.34■■□□□ 1.17
SPTLC1O15269 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.34■■□□□ 1.17
SPTLC1O15269 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SPTLC1O15269 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.34■■□□□ 1.17
SPTLC1O15269 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SPTLC1O15269 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SPTLC1O15269 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.33■■□□□ 1.17
SPTLC1O15269 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.33■■□□□ 1.17
SPTLC1O15269 AC244015.2-201ENST00000616358 1861 ntBASIC22.33■■□□□ 1.17
SPTLC1O15269 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPTLC1O15269 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPTLC1O15269 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPTLC1O15269 AC245052.3-201ENST00000450182 901 ntBASIC22.33■■□□□ 1.17
SPTLC1O15269 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SPTLC1O15269 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.33■■□□□ 1.17
SPTLC1O15269 AL138781.1-201ENST00000566567 1274 ntBASIC22.33■■□□□ 1.17
SPTLC1O15269 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.33■■□□□ 1.17
SPTLC1O15269 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.33■■□□□ 1.17
SPTLC1O15269 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPTLC1O15269 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPTLC1O15269 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
SPTLC1O15269 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
SPTLC1O15269 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SPTLC1O15269 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.33■■□□□ 1.16
SPTLC1O15269 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPTLC1O15269 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SPTLC1O15269 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SPTLC1O15269 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SPTLC1O15269 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPTLC1O15269 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.32■■□□□ 1.16
SPTLC1O15269 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SPTLC1O15269 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.32■■□□□ 1.16
SPTLC1O15269 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.32■■□□□ 1.16
SPTLC1O15269 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPTLC1O15269 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SPTLC1O15269 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.31■■□□□ 1.16
SPTLC1O15269 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.31■■□□□ 1.16
SPTLC1O15269 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.31■■□□□ 1.16
SPTLC1O15269 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.31■■□□□ 1.16
SPTLC1O15269 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.31■■□□□ 1.16
SPTLC1O15269 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.31■■□□□ 1.16
SPTLC1O15269 AC142086.2-201ENST00000569753 217 ntBASIC22.31■■□□□ 1.16
SPTLC1O15269 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.31■■□□□ 1.16
SPTLC1O15269 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.31■■□□□ 1.16
SPTLC1O15269 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.31■■□□□ 1.16
SPTLC1O15269 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.31■■□□□ 1.16
SPTLC1O15269 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SPTLC1O15269 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.3■■□□□ 1.16
SPTLC1O15269 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.3■■□□□ 1.16
SPTLC1O15269 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SPTLC1O15269 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SPTLC1O15269 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms