Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYN3O14994 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYN3O14994 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
SYN3O14994 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYN3O14994 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYN3O14994 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SYN3O14994 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SYN3O14994 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYN3O14994 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.12■■□□□ 1.13
SYN3O14994 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SYN3O14994 SERPINH1P1-201ENST00000419794 1249 ntBASIC22.12■■□□□ 1.13
SYN3O14994 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.12■■□□□ 1.13
SYN3O14994 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.12■■□□□ 1.13
SYN3O14994 RNA5SP413-201ENST00000516373 109 ntBASIC22.12■■□□□ 1.13
SYN3O14994 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.12■■□□□ 1.13
SYN3O14994 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.12■■□□□ 1.13
SYN3O14994 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.12■■□□□ 1.13
SYN3O14994 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SYN3O14994 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYN3O14994 CYP2T3P-201ENST00000601990 817 ntBASIC22.12■■□□□ 1.13
SYN3O14994 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SYN3O14994 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.11■■□□□ 1.13
SYN3O14994 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.11■■□□□ 1.13
SYN3O14994 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYN3O14994 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYN3O14994 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.11■■□□□ 1.13
SYN3O14994 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYN3O14994 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.11■■□□□ 1.13
SYN3O14994 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.11■■□□□ 1.13
SYN3O14994 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.11■■□□□ 1.13
SYN3O14994 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.11■■□□□ 1.13
SYN3O14994 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.11■■□□□ 1.13
SYN3O14994 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.11■■□□□ 1.13
SYN3O14994 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.11■■□□□ 1.13
SYN3O14994 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.11■■□□□ 1.13
SYN3O14994 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYN3O14994 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SYN3O14994 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYN3O14994 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.1■■□□□ 1.13
SYN3O14994 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SYN3O14994 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYN3O14994 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SYN3O14994 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYN3O14994 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SYN3O14994 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
SYN3O14994 MCRIP2P1-201ENST00000394346 511 ntBASIC22.1■■□□□ 1.13
SYN3O14994 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.1■■□□□ 1.13
SYN3O14994 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.1■■□□□ 1.13
SYN3O14994 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.1■■□□□ 1.13
SYN3O14994 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SYN3O14994 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SYN3O14994 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SYN3O14994 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.09■■□□□ 1.13
SYN3O14994 FAM201B-201ENST00000458407 597 ntBASIC22.09■■□□□ 1.13
SYN3O14994 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.09■■□□□ 1.13
SYN3O14994 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.09■■□□□ 1.13
SYN3O14994 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
SYN3O14994 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
SYN3O14994 KRT17P1-201ENST00000399211 1546 ntBASIC22.09■■□□□ 1.13
SYN3O14994 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SYN3O14994 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.09■■□□□ 1.13
SYN3O14994 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.09■■□□□ 1.13
SYN3O14994 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.08■■□□□ 1.13
SYN3O14994 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SYN3O14994 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.08■■□□□ 1.13
SYN3O14994 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SYN3O14994 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.08■■□□□ 1.13
SYN3O14994 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SYN3O14994 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
SYN3O14994 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.08■■□□□ 1.13
SYN3O14994 AL355472.2-201ENST00000422958 438 ntBASIC22.08■■□□□ 1.13
SYN3O14994 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.08■■□□□ 1.13
SYN3O14994 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC22.08■■□□□ 1.13
SYN3O14994 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SYN3O14994 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SYN3O14994 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SYN3O14994 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SYN3O14994 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.08■■□□□ 1.12
SYN3O14994 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYN3O14994 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SYN3O14994 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYN3O14994 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.07■■□□□ 1.12
SYN3O14994 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.07■■□□□ 1.12
SYN3O14994 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.07■■□□□ 1.12
SYN3O14994 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.07■■□□□ 1.12
SYN3O14994 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SYN3O14994 AL589743.5-201ENST00000616611 1050 ntBASIC22.07■■□□□ 1.12
SYN3O14994 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYN3O14994 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.07■■□□□ 1.12
SYN3O14994 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYN3O14994 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SYN3O14994 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms