Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A1O00337 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A1O00337 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A1O00337 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A1O00337 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC28A1O00337 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC28A1O00337 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC28A1O00337 LINC01006-201ENST00000333319 2292 ntBASIC20.06■□□□□ 0.8
SLC28A1O00337 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC28A1O00337 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
SLC28A1O00337 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC28A1O00337 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SLC28A1O00337 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC28A1O00337 EEF1DP3-203ENST00000566025 782 ntBASIC20.06■□□□□ 0.8
SLC28A1O00337 AL031432.3-201ENST00000607698 485 ntBASIC20.06■□□□□ 0.8
SLC28A1O00337 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC28A1O00337 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SLC28A1O00337 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC28A1O00337 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC28A1O00337 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC28A1O00337 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.05■□□□□ 0.8
SLC28A1O00337 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 AL354811.1-201ENST00000610286 706 ntBASIC20.05■□□□□ 0.8
SLC28A1O00337 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC28A1O00337 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC28A1O00337 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SLC28A1O00337 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC28A1O00337 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLC28A1O00337 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
SLC28A1O00337 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC28A1O00337 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SLC28A1O00337 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC28A1O00337 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC28A1O00337 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC28A1O00337 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC28A1O00337 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC28A1O00337 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
SLC28A1O00337 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC28A1O00337 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC28A1O00337 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC28A1O00337 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLC28A1O00337 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC28A1O00337 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC28A1O00337 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC28A1O00337 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC28A1O00337 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SLC28A1O00337 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC28A1O00337 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC28A1O00337 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 SUDS3P1-201ENST00000505831 966 ntBASIC20.02■□□□□ 0.8
SLC28A1O00337 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC28A1O00337 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC28A1O00337 AP004607.4-201ENST00000530158 1459 ntBASIC20.02■□□□□ 0.8
SLC28A1O00337 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC28A1O00337 GABARAPL3-202ENST00000624044 1851 ntBASIC20.02■□□□□ 0.8
SLC28A1O00337 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC28A1O00337 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SLC28A1O00337 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SLC28A1O00337 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC28A1O00337 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms