Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.25■□□□□ 0.67
TNFRSF11BO00300 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFRSF11BO00300 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFRSF11BO00300 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 AC007225.1-201ENST00000566331 1836 ntBASIC19.23■□□□□ 0.67
TNFRSF11BO00300 PCDHAC2-203ENST00000615316 3011 ntBASIC19.23■□□□□ 0.67
TNFRSF11BO00300 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 AC011298.3-201ENST00000615796 283 ntBASIC19.23■□□□□ 0.67
TNFRSF11BO00300 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFRSF11BO00300 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 SMUG1P1-201ENST00000590640 811 ntBASIC19.22■□□□□ 0.67
TNFRSF11BO00300 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFRSF11BO00300 AC020907.5-201ENST00000624372 1936 ntBASIC19.21■□□□□ 0.67
TNFRSF11BO00300 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 GUSBP5-201ENST00000418136 578 ntBASIC19.21■□□□□ 0.67
TNFRSF11BO00300 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 AL035685.1-201ENST00000636663 812 ntBASIC19.21■□□□□ 0.67
TNFRSF11BO00300 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFRSF11BO00300 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
TNFRSF11BO00300 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms