Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 GUSBP6-202ENST00000438529 1198 ntBASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 AL138781.1-201ENST00000566567 1274 ntBASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NPIPA2E9PIF3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 AC133552.2-202ENST00000575694 574 ntBASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 AC010542.4-201ENST00000563151 1910 ntBASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPIPA2E9PIF3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 AC068338.2-201ENST00000563278 1430 ntBASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NPIPA2E9PIF3 AC003102.1-202ENST00000563394 1796 ntBASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NPIPA2E9PIF3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 CD99P1-205ENST00000527459 561 ntBASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NPIPA2E9PIF3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA2E9PIF3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA2E9PIF3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA2E9PIF3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA2E9PIF3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.94■□□□□ 0.62
NPIPA2E9PIF3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NPIPA2E9PIF3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms