Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPB4C9JG80 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPB4C9JG80 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPB4C9JG80 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPB4C9JG80 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NPIPB4C9JG80 AC004854.2-201ENST00000608450 1441 ntBASIC18.48■□□□□ 0.55
NPIPB4C9JG80 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 KRT19P1-201ENST00000405746 1186 ntBASIC18.47■□□□□ 0.55
NPIPB4C9JG80 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 AC243732.1-201ENST00000612648 864 ntBASIC18.47■□□□□ 0.55
NPIPB4C9JG80 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NPIPB4C9JG80 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPIPB4C9JG80 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NPIPB4C9JG80 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NPIPB4C9JG80 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPIPB4C9JG80 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.44■□□□□ 0.54
NPIPB4C9JG80 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPIPB4C9JG80 AC097381.1-201ENST00000429019 1296 ntBASIC18.43■□□□□ 0.54
NPIPB4C9JG80 SLC7A5P2-201ENST00000553010 536 ntBASIC18.43■□□□□ 0.54
NPIPB4C9JG80 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms