Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC01548A6NM66 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 AL024507.2-201ENST00000606070 2574 ntBASIC16.48■□□□□ 0.23
LINC01548A6NM66 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 RBM17P2-201ENST00000616397 1405 ntBASIC16.48■□□□□ 0.23
LINC01548A6NM66 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LINC01548A6NM66 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 CNN2P6-201ENST00000439038 900 ntBASIC16.48■□□□□ 0.23
LINC01548A6NM66 AC026185.1-201ENST00000445748 174 ntBASIC16.48■□□□□ 0.23
LINC01548A6NM66 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.48■□□□□ 0.23
LINC01548A6NM66 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LINC01548A6NM66 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.48■□□□□ 0.23
LINC01548A6NM66 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.48■□□□□ 0.23
LINC01548A6NM66 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LINC01548A6NM66 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
LINC01548A6NM66 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LINC01548A6NM66 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 AC007375.3-201ENST00000600936 2314 ntBASIC16.47■□□□□ 0.23
LINC01548A6NM66 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LINC01548A6NM66 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LINC01548A6NM66 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 CROCCP5-201ENST00000436658 830 ntBASIC16.46■□□□□ 0.23
LINC01548A6NM66 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.46■□□□□ 0.23
LINC01548A6NM66 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LINC01548A6NM66 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.46■□□□□ 0.22
LINC01548A6NM66 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
LINC01548A6NM66 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
LINC01548A6NM66 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC01548A6NM66 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC01548A6NM66 AC007322.1-201ENST00000426983 750 ntBASIC16.45■□□□□ 0.22
LINC01548A6NM66 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC01548A6NM66 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC01548A6NM66 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.45■□□□□ 0.22
LINC01548A6NM66 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LINC01548A6NM66 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LINC01548A6NM66 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.45■□□□□ 0.22
LINC01548A6NM66 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 FEM1AP4-201ENST00000443167 1987 ntBASIC16.44■□□□□ 0.22
LINC01548A6NM66 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC01548A6NM66 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC01548A6NM66 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms