Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D3FA6NER0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D3FA6NER0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 GUSBP5-202ENST00000510805 1989 ntBASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 LSM12P1-201ENST00000411836 588 ntBASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 FAM21FP-204ENST00000608637 956 ntBASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TBC1D3FA6NER0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 DUSP5P2-201ENST00000426873 1033 ntBASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 AC091874.3-201ENST00000512672 1195 ntBASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.78■□□□□ 0.92
TBC1D3FA6NER0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 AC083880.1-201ENST00000608266 535 ntBASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.77■□□□□ 0.92
TBC1D3FA6NER0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
TBC1D3FA6NER0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TBC1D3FA6NER0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.77■□□□□ 0.91
TBC1D3FA6NER0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TBC1D3FA6NER0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TBC1D3FA6NER0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 AL355472.2-201ENST00000422958 438 ntBASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.76■□□□□ 0.91
TBC1D3FA6NER0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms