Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 AP004607.7-201ENST00000527152 1677 ntBASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 AC087239.1-201ENST00000622671 572 ntBASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 AC138932.1-201ENST00000534164 6830 ntBASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MEIS3P1A6NDR6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
MEIS3P1A6NDR6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MEIS3P1A6NDR6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
MEIS3P1A6NDR6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MEIS3P1A6NDR6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MEIS3P1A6NDR6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MEIS3P1A6NDR6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MEIS3P1A6NDR6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MEIS3P1A6NDR6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
MEIS3P1A6NDR6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
MEIS3P1A6NDR6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
MEIS3P1A6NDR6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.83■□□□□ 0.44
MEIS3P1A6NDR6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MEIS3P1A6NDR6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MEIS3P1A6NDR6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 AC010141.3-201ENST00000456659 717 ntBASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 AC068587.7-201ENST00000641602 218 ntBASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MEIS3P1A6NDR6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MEIS3P1A6NDR6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 AL034346.1-201ENST00000568244 1277 ntBASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 AC099791.2-201ENST00000605725 427 ntBASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MEIS3P1A6NDR6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms