Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 KRT18P68-201ENST00000392293 1000 ntBASIC28.5■■■□□ 2.15
SBNO1A3KN83 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 AC010331.1-201ENST00000611423 582 ntBASIC28.5■■■□□ 2.15
SBNO1A3KN83 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SBNO1A3KN83 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC28.5■■■□□ 2.15
SBNO1A3KN83 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.49■■■□□ 2.15
SBNO1A3KN83 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC28.49■■■□□ 2.15
SBNO1A3KN83 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC28.49■■■□□ 2.15
SBNO1A3KN83 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
SBNO1A3KN83 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 MFF-205ENST00000354503 1085 ntTSL 2 BASIC28.49■■■□□ 2.15
SBNO1A3KN83 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC28.49■■■□□ 2.15
SBNO1A3KN83 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 POM121L13P-201ENST00000422362 380 ntBASIC28.49■■■□□ 2.15
SBNO1A3KN83 BX088651.1-201ENST00000540551 451 ntBASIC28.49■■■□□ 2.15
SBNO1A3KN83 AC233702.5-201ENST00000584107 538 ntBASIC28.49■■■□□ 2.15
SBNO1A3KN83 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
SBNO1A3KN83 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SBNO1A3KN83 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
SBNO1A3KN83 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SBNO1A3KN83 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SBNO1A3KN83 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SBNO1A3KN83 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SBNO1A3KN83 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
SBNO1A3KN83 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC28.48■■■□□ 2.15
SBNO1A3KN83 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SBNO1A3KN83 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
SBNO1A3KN83 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC28.47■■■□□ 2.15
SBNO1A3KN83 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SBNO1A3KN83 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.47■■■□□ 2.15
SBNO1A3KN83 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SBNO1A3KN83 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SBNO1A3KN83 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SBNO1A3KN83 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
SBNO1A3KN83 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 CRK-204ENST00000574295 1391 ntTSL 5 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SBNO1A3KN83 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SBNO1A3KN83 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
SBNO1A3KN83 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SBNO1A3KN83 REXO2-208ENST00000539754 791 ntTSL 2 BASIC28.46■■■□□ 2.15
SBNO1A3KN83 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SBNO1A3KN83 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
SBNO1A3KN83 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC28.45■■■□□ 2.15
SBNO1A3KN83 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
SBNO1A3KN83 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SBNO1A3KN83 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC28.45■■■□□ 2.14
SBNO1A3KN83 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC28.45■■■□□ 2.14
SBNO1A3KN83 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
SBNO1A3KN83 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SBNO1A3KN83 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
SBNO1A3KN83 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
SBNO1A3KN83 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC28.44■■■□□ 2.14
SBNO1A3KN83 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SBNO1A3KN83 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
SBNO1A3KN83 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SBNO1A3KN83 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SBNO1A3KN83 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC28.44■■■□□ 2.14
SBNO1A3KN83 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC28.44■■■□□ 2.14
SBNO1A3KN83 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC28.44■■■□□ 2.14
SBNO1A3KN83 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SBNO1A3KN83 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC28.44■■■□□ 2.14
SBNO1A3KN83 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SBNO1A3KN83 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SBNO1A3KN83 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SBNO1A3KN83 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms