Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC121338.2-201ENST00000622535 1744 ntBASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.69□□□□□ -0.06
TRBV6-4A0A1B0GX49 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 KRT16P2-201ENST00000414673 1423 ntBASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 YBX1P1-201ENST00000445822 960 ntBASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 AC061975.6-201ENST00000579045 1553 ntBASIC14.68□□□□□ -0.06
TRBV6-4A0A1B0GX49 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TRBV6-4A0A1B0GX49 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRBV6-4A0A1B0GX49 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRBV6-4A0A1B0GX49 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms