Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TDRD1-203ENST00000369282 3705 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 MAGEB17-202ENST00000400004 1434 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC102945.2-201ENST00000623026 1422 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 CCDC181-202ENST00000367806 1860 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC022336.3-201ENST00000624807 1986 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 C14orf159-228ENST00000523771 2976 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 LRRC55-201ENST00000497933 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 DNAJB5-210ENST00000545841 3068 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 DKK2-201ENST00000285311 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AHI1-202ENST00000327035 3638 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 PRAMEF1-201ENST00000332296 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 CCDC40-204ENST00000397545 4294 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC243967.3-201ENST00000614316 2265 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 CINP-201ENST00000216756 955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 NDUFB6-201ENST00000350021 666 ntTSL 2 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 SLC25A20P1-201ENST00000408043 903 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 RN7SKP54-201ENST00000410704 269 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 FRG2FP-203ENST00000422555 567 ntTSL 4 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 IFNWP19-201ENST00000438727 566 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 PHKA2-AS1-201ENST00000439295 597 ntTSL 3 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 DERL1-205ENST00000523036 542 ntTSL 4 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 MRPL2P1-201ENST00000546688 919 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC087516.2-203ENST00000558875 601 ntTSL 3 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC120498.2-201ENST00000566997 249 ntTSL 3 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 RN7SL405P-201ENST00000582502 289 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 RN7SL577P-201ENST00000584532 303 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 TDGF1P7-201ENST00000593394 559 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 ZNF611-207ENST00000596702 538 ntTSL 4 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AP002840.2-201ENST00000602900 640 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 BNIP3P36-201ENST00000603076 574 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AL591222.3-201ENST00000611241 756 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AL109976.1-201ENST00000621919 5678 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 SSBP2-219ENST00000515395 1398 ntTSL 2 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC010595.1-201ENST00000507387 1453 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC244636.2-201ENST00000448031 1669 ntBASIC10.85□□□□□ -0.67
LMO3Q8TAP4 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 PLAA-201ENST00000397292 4234 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 ZBTB34-201ENST00000319119 6564 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 ZC3H12C-203ENST00000528673 2931 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
LMO3Q8TAP4 AC079193.2-201ENST00000513892 2292 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 CX3CR1-206ENST00000542107 3215 ntAPPRIS P1 TSL 4 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 LPAR3-202ENST00000440886 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 PGAM1P8-202ENST00000534819 2354 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 BPNT1-210ENST00000544404 2379 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AL356235.1-201ENST00000602791 2363 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC005035.1-201ENST00000627215 3727 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 PRAMEF2-201ENST00000240189 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC007424.1-201ENST00000552582 1641 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC106028.3-201ENST00000562894 1736 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 GGA2-201ENST00000309859 5973 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 TMEM254-205ENST00000372281 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 HBS1L-204ENST00000367826 2703 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 TRAPPC6B-202ENST00000347691 3229 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 SPRR1B-201ENST00000307098 620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 SNORA80C-201ENST00000362917 135 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 C20orf173-202ENST00000374345 985 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 ZNF483-204ENST00000374374 800 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 TRDV2-201ENST00000390469 520 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 HNRNPA1P34-201ENST00000391992 950 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 MED6-203ENST00000440435 931 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 MIR3681HG-207ENST00000451644 623 ntTSL 3 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC097066.1-201ENST00000456878 683 ntTSL 5 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 IFT22-209ENST00000498704 917 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 SMUG1-222ENST00000514685 926 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC005280.1-201ENST00000515412 537 ntTSL 5 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 VN1R46P-201ENST00000519939 850 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 LYPLA1-213ENST00000522007 250 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 LINC01863-201ENST00000523242 494 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 PRELID1P4-201ENST00000561466 512 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 MIR762HG-202ENST00000565573 1125 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC090282.2-201ENST00000573526 931 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC011467.3-201ENST00000599738 429 ntTSL 5 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 CHCHD2P11-201ENST00000604283 457 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 Metazoa_SRP.161-201ENST00000617435 256 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 AC027228.3-201ENST00000623556 1266 ntBASIC10.84□□□□□ -0.67
LMO3Q8TAP4 LINC01002-217ENST00000632405 600 ntTSL 2 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 ARG1-207ENST00000640973 708 ntTSL 5 BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
LMO3Q8TAP4 SEC22C-201ENST00000264454 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms