Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCA3PQ9Y6N3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 KRT18P11-201ENST00000435214 1283 ntBASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 FBXW4P1-201ENST00000426721 2239 ntBASIC19.7■□□□□ 0.74
CLCA3PQ9Y6N3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 KRT18P20-201ENST00000548986 1279 ntBASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CLCA3PQ9Y6N3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CLCA3PQ9Y6N3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCA3PQ9Y6N3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 AC006015.1-201ENST00000429970 570 ntBASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.66■□□□□ 0.74
CLCA3PQ9Y6N3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms