Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
NRXN3Q9Y4C0 SAPCD2P1-201ENST00000395413 1184 ntBASIC29.67■■■□□ 2.34
NRXN3Q9Y4C0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC29.67■■■□□ 2.34
NRXN3Q9Y4C0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
NRXN3Q9Y4C0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC29.67■■■□□ 2.34
NRXN3Q9Y4C0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 AL589743.5-201ENST00000616611 1050 ntBASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NRXN3Q9Y4C0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 AC073912.3-201ENST00000624414 853 ntBASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC29.65■■■□□ 2.34
NRXN3Q9Y4C0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
NRXN3Q9Y4C0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NRXN3Q9Y4C0 AC007322.3-201ENST00000426526 701 ntBASIC29.64■■■□□ 2.34
NRXN3Q9Y4C0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC29.64■■■□□ 2.34
NRXN3Q9Y4C0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC29.64■■■□□ 2.34
NRXN3Q9Y4C0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC29.64■■■□□ 2.34
NRXN3Q9Y4C0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 CDV3P1-201ENST00000471403 739 ntBASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 SNORA78-201ENST00000459373 127 ntBASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 AC068473.5-201ENST00000616428 2072 ntBASIC29.63■■■□□ 2.33
NRXN3Q9Y4C0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
NRXN3Q9Y4C0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
NRXN3Q9Y4C0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
NRXN3Q9Y4C0 CYP21A1P-202ENST00000354927 1481 ntBASIC29.62■■■□□ 2.33
NRXN3Q9Y4C0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
NRXN3Q9Y4C0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 MIR718-201ENST00000390190 70 ntBASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 Z99916.2-201ENST00000604037 246 ntBASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
NRXN3Q9Y4C0 AC012618.2-201ENST00000428058 849 ntBASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC29.6■■■□□ 2.33
NRXN3Q9Y4C0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
NRXN3Q9Y4C0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 POM121L13P-201ENST00000422362 380 ntBASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 GXYLT1P3-201ENST00000453058 1193 ntBASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC29.58■■■□□ 2.33
NRXN3Q9Y4C0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
NRXN3Q9Y4C0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
NRXN3Q9Y4C0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC29.57■■■□□ 2.32
NRXN3Q9Y4C0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
NRXN3Q9Y4C0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC29.57■■■□□ 2.32
NRXN3Q9Y4C0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC29.57■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms