Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 AC010536.3-201ENST00000620306 533 ntBASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NPIPA1Q9UND3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPIPA1Q9UND3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPIPA1Q9UND3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPIPA1Q9UND3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NPIPA1Q9UND3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NPIPA1Q9UND3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 CNN2P6-201ENST00000439038 900 ntBASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 SLC7A5P2-201ENST00000553010 536 ntBASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 EEF1DP3-203ENST00000566025 782 ntBASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 AC053503.5-201ENST00000601508 636 ntBASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.25■□□□□ 0.67
NPIPA1Q9UND3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 AC142086.2-201ENST00000569753 217 ntBASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NPIPA1Q9UND3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 AF201337.1-201ENST00000520239 748 ntBASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 CD99P1-205ENST00000527459 561 ntBASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.23■□□□□ 0.67
NPIPA1Q9UND3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 GUSBP6-202ENST00000438529 1198 ntBASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 AL138781.1-201ENST00000566567 1274 ntBASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 AC105036.2-201ENST00000569468 176 ntBASIC19.22■□□□□ 0.67
NPIPA1Q9UND3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms