Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC3Q9UN70 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 RARRES2P11-201ENST00000635158 484 ntBASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC3Q9UN70 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGC3Q9UN70 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC3Q9UN70 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PCDHGC3Q9UN70 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PCDHGC3Q9UN70 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC3Q9UN70 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC3Q9UN70 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC3Q9UN70 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC3Q9UN70 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 MIR5787-201ENST00000611784 55 ntBASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.07■■□□□ 1.12
PCDHGC3Q9UN70 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC3Q9UN70 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 AC245052.3-201ENST00000450182 901 ntBASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 UBE2DNL-204ENST00000602536 740 ntBASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGC3Q9UN70 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 AC243732.1-201ENST00000612648 864 ntBASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGC3Q9UN70 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGC3Q9UN70 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms