Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VAPAQ9P0L0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 AC027702.1-201ENST00000563810 1770 ntBASIC19.75■□□□□ 0.75
VAPAQ9P0L0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VAPAQ9P0L0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 AC233992.3-201ENST00000607491 485 ntBASIC19.74■□□□□ 0.75
VAPAQ9P0L0 AC009237.3-201ENST00000393279 1427 ntBASIC19.74■□□□□ 0.75
VAPAQ9P0L0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VAPAQ9P0L0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 AL136116.3-201ENST00000402907 1138 ntBASIC19.73■□□□□ 0.75
VAPAQ9P0L0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.73■□□□□ 0.75
VAPAQ9P0L0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 AC007225.1-201ENST00000566331 1836 ntBASIC19.72■□□□□ 0.75
VAPAQ9P0L0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.72■□□□□ 0.75
VAPAQ9P0L0 UNC93B3-201ENST00000308076 687 ntBASIC19.72■□□□□ 0.75
VAPAQ9P0L0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 IGHV3-19-201ENST00000521488 291 ntBASIC19.72■□□□□ 0.75
VAPAQ9P0L0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 AC126544.1-201ENST00000580842 1059 ntBASIC19.72■□□□□ 0.75
VAPAQ9P0L0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VAPAQ9P0L0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 AL121603.2-201ENST00000557373 2117 ntBASIC19.71■□□□□ 0.75
VAPAQ9P0L0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
VAPAQ9P0L0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
VAPAQ9P0L0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.7■□□□□ 0.74
VAPAQ9P0L0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms