Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNIH4Q9P003 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CNIH4Q9P003 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNIH4Q9P003 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CNIH4Q9P003 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 AC016769.1-201ENST00000409132 1010 ntBASIC19.51■□□□□ 0.71
CNIH4Q9P003 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.51■□□□□ 0.71
CNIH4Q9P003 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.51■□□□□ 0.71
CNIH4Q9P003 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CNIH4Q9P003 AC104187.1-201ENST00000607510 612 ntBASIC19.51■□□□□ 0.71
CNIH4Q9P003 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.51■□□□□ 0.71
CNIH4Q9P003 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNIH4Q9P003 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CNIH4Q9P003 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.5■□□□□ 0.71
CNIH4Q9P003 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 IKBKGP1-201ENST00000612193 1073 ntBASIC19.5■□□□□ 0.71
CNIH4Q9P003 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CNIH4Q9P003 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.5■□□□□ 0.71
CNIH4Q9P003 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.5■□□□□ 0.71
CNIH4Q9P003 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.5■□□□□ 0.71
CNIH4Q9P003 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH4Q9P003 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.49■□□□□ 0.71
CNIH4Q9P003 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.49■□□□□ 0.71
CNIH4Q9P003 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH4Q9P003 KRT18P11-201ENST00000435214 1283 ntBASIC19.49■□□□□ 0.71
CNIH4Q9P003 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH4Q9P003 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CNIH4Q9P003 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CNIH4Q9P003 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CNIH4Q9P003 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH4Q9P003 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CNIH4Q9P003 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.49■□□□□ 0.71
CNIH4Q9P003 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 AC006015.1-201ENST00000429970 570 ntBASIC19.48■□□□□ 0.71
CNIH4Q9P003 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 AC053503.5-201ENST00000601508 636 ntBASIC19.48■□□□□ 0.71
CNIH4Q9P003 AC092437.1-201ENST00000624794 1048 ntBASIC19.48■□□□□ 0.71
CNIH4Q9P003 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CNIH4Q9P003 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
CNIH4Q9P003 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 EEF1DP3-203ENST00000566025 782 ntBASIC19.47■□□□□ 0.71
CNIH4Q9P003 AC138907.5-202ENST00000569484 235 ntBASIC19.47■□□□□ 0.71
CNIH4Q9P003 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.47■□□□□ 0.71
CNIH4Q9P003 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CNIH4Q9P003 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH4Q9P003 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.46■□□□□ 0.71
CNIH4Q9P003 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH4Q9P003 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.46■□□□□ 0.71
CNIH4Q9P003 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.46■□□□□ 0.71
CNIH4Q9P003 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH4Q9P003 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH4Q9P003 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH4Q9P003 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNIH4Q9P003 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms