Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 AC005224.4-201ENST00000583262 1652 ntBASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 TSPY26P-201ENST00000476365 1326 ntBASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 AC096631.2-201ENST00000436136 790 ntBASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 AL355001.2-201ENST00000620617 1191 ntBASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
THUMPD1Q9NXG2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 RASA4CP-201ENST00000424092 1398 ntBASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 AL121603.2-201ENST00000557373 2117 ntBASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
THUMPD1Q9NXG2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 MIR572-201ENST00000384983 95 ntBASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.6■□□□□ 0.73
THUMPD1Q9NXG2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
THUMPD1Q9NXG2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.58■□□□□ 0.73
THUMPD1Q9NXG2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 AC091305.1-201ENST00000479476 895 ntBASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 AP001330.3-201ENST00000520123 633 ntBASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
THUMPD1Q9NXG2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD1Q9NXG2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.57■□□□□ 0.72
THUMPD1Q9NXG2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD1Q9NXG2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD1Q9NXG2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD1Q9NXG2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.57■□□□□ 0.72
THUMPD1Q9NXG2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
THUMPD1Q9NXG2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms