Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRF2Q9HAW0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 AC121338.2-201ENST00000622535 1744 ntBASIC19.96■□□□□ 0.79
BRF2Q9HAW0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 TERF1P2-201ENST00000583350 1212 ntBASIC19.96■□□□□ 0.79
BRF2Q9HAW0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.96■□□□□ 0.79
BRF2Q9HAW0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 PLK5-205ENST00000642079 1969 ntBASIC19.95■□□□□ 0.78
BRF2Q9HAW0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF2Q9HAW0 KRT16P2-201ENST00000414673 1423 ntBASIC19.94■□□□□ 0.78
BRF2Q9HAW0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 AC010141.2-201ENST00000452426 721 ntBASIC19.94■□□□□ 0.78
BRF2Q9HAW0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF2Q9HAW0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.93■□□□□ 0.78
BRF2Q9HAW0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.93■□□□□ 0.78
BRF2Q9HAW0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms