Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 AC010980.2-201ENST00000587099 1412 ntBASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
LRRN3Q9H3W5 AC233723.2-201ENST00000623798 2106 ntBASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 AC097658.1-201ENST00000475555 843 ntBASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRN3Q9H3W5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
LRRN3Q9H3W5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 AC083880.1-201ENST00000608266 535 ntBASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 ITM2C-210ENST00000620962 501 ntBASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 MYC-209ENST00000641252 345 ntBASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRN3Q9H3W5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRN3Q9H3W5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 KRT18P29-201ENST00000397031 1267 ntBASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 AC091874.3-201ENST00000512672 1195 ntBASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 AC008687.6-201ENST00000596318 630 ntBASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRN3Q9H3W5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRN3Q9H3W5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRN3Q9H3W5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms