Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDT1Q9H211 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.74■■□□□ 1.23
CDT1Q9H211 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CDT1Q9H211 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CDT1Q9H211 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDT1Q9H211 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
CDT1Q9H211 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDT1Q9H211 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDT1Q9H211 GPX1P1-201ENST00000388829 606 ntBASIC22.73■■□□□ 1.23
CDT1Q9H211 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDT1Q9H211 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.73■■□□□ 1.23
CDT1Q9H211 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CDT1Q9H211 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.73■■□□□ 1.23
CDT1Q9H211 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.73■■□□□ 1.23
CDT1Q9H211 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.73■■□□□ 1.23
CDT1Q9H211 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.73■■□□□ 1.23
CDT1Q9H211 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CDT1Q9H211 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
CDT1Q9H211 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 AC091799.1-201ENST00000422823 811 ntBASIC22.72■■□□□ 1.23
CDT1Q9H211 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CDT1Q9H211 AC083906.2-201ENST00000511578 360 ntBASIC22.72■■□□□ 1.23
CDT1Q9H211 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
CDT1Q9H211 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 AL109923.1-201ENST00000618799 583 ntBASIC22.72■■□□□ 1.23
CDT1Q9H211 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.72■■□□□ 1.23
CDT1Q9H211 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
CDT1Q9H211 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.72■■□□□ 1.23
CDT1Q9H211 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.72■■□□□ 1.23
CDT1Q9H211 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CDT1Q9H211 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 GUSBP6-202ENST00000438529 1198 ntBASIC22.71■■□□□ 1.23
CDT1Q9H211 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.71■■□□□ 1.23
CDT1Q9H211 AC133552.2-202ENST00000575694 574 ntBASIC22.71■■□□□ 1.23
CDT1Q9H211 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.71■■□□□ 1.23
CDT1Q9H211 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDT1Q9H211 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
CDT1Q9H211 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.7■■□□□ 1.23
CDT1Q9H211 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDT1Q9H211 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.7■■□□□ 1.23
CDT1Q9H211 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDT1Q9H211 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDT1Q9H211 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.7■■□□□ 1.22
CDT1Q9H211 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CDT1Q9H211 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.7■■□□□ 1.22
CDT1Q9H211 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.7■■□□□ 1.22
CDT1Q9H211 AL591742.1-201ENST00000604433 565 ntBASIC22.7■■□□□ 1.22
CDT1Q9H211 AC016405.3-201ENST00000607710 860 ntBASIC22.7■■□□□ 1.22
CDT1Q9H211 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.7■■□□□ 1.22
CDT1Q9H211 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDT1Q9H211 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDT1Q9H211 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.7■■□□□ 1.22
CDT1Q9H211 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.7■■□□□ 1.22
CDT1Q9H211 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDT1Q9H211 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CDT1Q9H211 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.69■■□□□ 1.22
CDT1Q9H211 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.69■■□□□ 1.22
CDT1Q9H211 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CDT1Q9H211 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CDT1Q9H211 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.69■■□□□ 1.22
CDT1Q9H211 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDT1Q9H211 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CDT1Q9H211 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.68■■□□□ 1.22
CDT1Q9H211 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDT1Q9H211 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDT1Q9H211 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDT1Q9H211 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDT1Q9H211 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDT1Q9H211 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDT1Q9H211 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDT1Q9H211 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDT1Q9H211 TSPY6P-201ENST00000448518 926 ntBASIC22.68■■□□□ 1.22
CDT1Q9H211 AF201337.1-201ENST00000520239 748 ntBASIC22.68■■□□□ 1.22
CDT1Q9H211 AL162412.1-201ENST00000567129 965 ntBASIC22.68■■□□□ 1.22
CDT1Q9H211 AC105036.2-201ENST00000569468 176 ntBASIC22.68■■□□□ 1.22
CDT1Q9H211 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.68■■□□□ 1.22
CDT1Q9H211 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.68■■□□□ 1.22
CDT1Q9H211 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.68■■□□□ 1.22
CDT1Q9H211 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.68■■□□□ 1.22
CDT1Q9H211 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms