Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21■□□□□ 0.95
CLPBQ9H078 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLPBQ9H078 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLPBQ9H078 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLPBQ9H078 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CLPBQ9H078 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.99■□□□□ 0.95
CLPBQ9H078 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.99■□□□□ 0.95
CLPBQ9H078 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.99■□□□□ 0.95
CLPBQ9H078 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLPBQ9H078 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 Z98882.1-201ENST00000622160 2253 ntBASIC20.99■□□□□ 0.95
CLPBQ9H078 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.99■□□□□ 0.95
CLPBQ9H078 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLPBQ9H078 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPBQ9H078 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 AC006970.2-201ENST00000450065 779 ntBASIC20.98■□□□□ 0.95
CLPBQ9H078 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CLPBQ9H078 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.98■□□□□ 0.95
CLPBQ9H078 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.98■□□□□ 0.95
CLPBQ9H078 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPBQ9H078 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPBQ9H078 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPBQ9H078 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPBQ9H078 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.97■□□□□ 0.95
CLPBQ9H078 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLPBQ9H078 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPBQ9H078 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.97■□□□□ 0.95
CLPBQ9H078 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.97■□□□□ 0.95
CLPBQ9H078 AC104771.1-201ENST00000603335 964 ntBASIC20.97■□□□□ 0.95
CLPBQ9H078 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPBQ9H078 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPBQ9H078 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.96■□□□□ 0.95
CLPBQ9H078 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.96■□□□□ 0.95
CLPBQ9H078 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLPBQ9H078 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 MIR663A-201ENST00000385250 93 ntBASIC20.96■□□□□ 0.95
CLPBQ9H078 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.96■□□□□ 0.95
CLPBQ9H078 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPBQ9H078 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.96■□□□□ 0.95
CLPBQ9H078 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLPBQ9H078 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 NCF1B-203ENST00000435988 1254 ntBASIC20.95■□□□□ 0.94
CLPBQ9H078 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.95■□□□□ 0.94
CLPBQ9H078 DUX4L16-201ENST00000555130 1264 ntBASIC20.95■□□□□ 0.94
CLPBQ9H078 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.95■□□□□ 0.94
CLPBQ9H078 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 AC007375.3-201ENST00000600936 2314 ntBASIC20.95■□□□□ 0.94
CLPBQ9H078 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPBQ9H078 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLPBQ9H078 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLPBQ9H078 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.94■□□□□ 0.94
CLPBQ9H078 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLPBQ9H078 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms