Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AL356740.2-201ENST00000601559 647 ntBASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 AL512631.2-201ENST00000604634 923 ntBASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 SERBP1P1-201ENST00000396021 1160 ntBASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 SLC47A1P1-202ENST00000449666 945 ntBASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 OR2A1-AS1-204ENST00000470435 602 ntBASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC10.59□□□□□ -0.71
KRTAP3-1Q9BYR8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC10.58□□□□□ -0.71
KRTAP3-1Q9BYR8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 AC099778.1-201ENST00000568593 1911 ntBASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 PTCHD3P2-201ENST00000424937 1205 ntBASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 SMUG1P1-201ENST00000590640 811 ntBASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-1Q9BYR8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 SYT6-210ENST00000641643 1587 ntBASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 SRD5A1P1-201ENST00000442297 786 ntBASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-1Q9BYR8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms