Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
FOXC2Q99958 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.66■□□□□ 0.42
FOXC2Q99958 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
FOXC2Q99958 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.66■□□□□ 0.42
FOXC2Q99958 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FOXC2Q99958 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
FOXC2Q99958 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FOXC2Q99958 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
FOXC2Q99958 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FOXC2Q99958 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FOXC2Q99958 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.65■□□□□ 0.42
FOXC2Q99958 SOX15-203ENST00000570788 1093 ntBASIC17.65■□□□□ 0.42
FOXC2Q99958 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.65■□□□□ 0.42
FOXC2Q99958 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.65■□□□□ 0.42
FOXC2Q99958 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.65■□□□□ 0.42
FOXC2Q99958 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.65■□□□□ 0.42
FOXC2Q99958 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
FOXC2Q99958 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
FOXC2Q99958 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
FOXC2Q99958 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.65■□□□□ 0.42
FOXC2Q99958 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.64■□□□□ 0.42
FOXC2Q99958 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.64■□□□□ 0.41
FOXC2Q99958 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 TSPY7P-201ENST00000431358 1114 ntBASIC17.64■□□□□ 0.41
FOXC2Q99958 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXC2Q99958 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXC2Q99958 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.64■□□□□ 0.41
FOXC2Q99958 AC097493.4-201ENST00000641197 219 ntBASIC17.64■□□□□ 0.41
FOXC2Q99958 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
FOXC2Q99958 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
FOXC2Q99958 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.64■□□□□ 0.41
FOXC2Q99958 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXC2Q99958 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXC2Q99958 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
FOXC2Q99958 LINC00526-201ENST00000581067 1875 ntBASIC17.63■□□□□ 0.41
FOXC2Q99958 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FOXC2Q99958 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXC2Q99958 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
FOXC2Q99958 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXC2Q99958 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
FOXC2Q99958 AC087499.1-201ENST00000418141 1075 ntBASIC17.63■□□□□ 0.41
FOXC2Q99958 POM121L13P-201ENST00000422362 380 ntBASIC17.63■□□□□ 0.41
FOXC2Q99958 CDV3P1-201ENST00000471403 739 ntBASIC17.63■□□□□ 0.41
FOXC2Q99958 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.63■□□□□ 0.41
FOXC2Q99958 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXC2Q99958 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXC2Q99958 MIR4785-201ENST00000585005 73 ntBASIC17.63■□□□□ 0.41
FOXC2Q99958 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
FOXC2Q99958 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
FOXC2Q99958 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXC2Q99958 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.63■□□□□ 0.41
FOXC2Q99958 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FOXC2Q99958 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
FOXC2Q99958 RCN1P1-201ENST00000400413 996 ntBASIC17.62■□□□□ 0.41
FOXC2Q99958 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.62■□□□□ 0.41
FOXC2Q99958 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXC2Q99958 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
FOXC2Q99958 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXC2Q99958 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.62■□□□□ 0.41
FOXC2Q99958 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
FOXC2Q99958 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 AL135905.2-201ENST00000584934 1404 ntBASIC17.62■□□□□ 0.41
FOXC2Q99958 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.62■□□□□ 0.41
FOXC2Q99958 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FOXC2Q99958 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
FOXC2Q99958 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.61■□□□□ 0.41
FOXC2Q99958 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FOXC2Q99958 MCRIP2P1-201ENST00000394346 511 ntBASIC17.61■□□□□ 0.41
FOXC2Q99958 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms