Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHOX2BQ99453 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHOX2BQ99453 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 EEF1DP3-203ENST00000566025 782 ntBASIC21.17■□□□□ 0.98
PHOX2BQ99453 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHOX2BQ99453 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHOX2BQ99453 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHOX2BQ99453 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHOX2BQ99453 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHOX2BQ99453 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHOX2BQ99453 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHOX2BQ99453 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHOX2BQ99453 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHOX2BQ99453 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 PNMA6B-201ENST00000538162 1200 ntBASIC21.16■□□□□ 0.98
PHOX2BQ99453 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 AL353708.3-201ENST00000610272 989 ntBASIC21.16■□□□□ 0.98
PHOX2BQ99453 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 AC092865.7-201ENST00000641832 219 ntBASIC21.16■□□□□ 0.98
PHOX2BQ99453 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.16■□□□□ 0.98
PHOX2BQ99453 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHOX2BQ99453 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHOX2BQ99453 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHOX2BQ99453 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
PHOX2BQ99453 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PHOX2BQ99453 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.15■□□□□ 0.98
PHOX2BQ99453 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.15■□□□□ 0.98
PHOX2BQ99453 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.15■□□□□ 0.98
PHOX2BQ99453 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHOX2BQ99453 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHOX2BQ99453 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHOX2BQ99453 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.14■□□□□ 0.98
PHOX2BQ99453 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PHOX2BQ99453 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PHOX2BQ99453 AL355472.2-201ENST00000422958 438 ntBASIC21.14■□□□□ 0.97
PHOX2BQ99453 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.14■□□□□ 0.97
PHOX2BQ99453 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PHOX2BQ99453 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.14■□□□□ 0.97
PHOX2BQ99453 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.14■□□□□ 0.97
PHOX2BQ99453 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.14■□□□□ 0.97
PHOX2BQ99453 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.14■□□□□ 0.97
PHOX2BQ99453 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.14■□□□□ 0.97
PHOX2BQ99453 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHOX2BQ99453 AC113410.3-201ENST00000623366 203 ntBASIC21.14■□□□□ 0.97
PHOX2BQ99453 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.14■□□□□ 0.97
PHOX2BQ99453 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.13■□□□□ 0.97
PHOX2BQ99453 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.13■□□□□ 0.97
PHOX2BQ99453 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHOX2BQ99453 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.13■□□□□ 0.97
PHOX2BQ99453 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.13■□□□□ 0.97
PHOX2BQ99453 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.12■□□□□ 0.97
PHOX2BQ99453 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PHOX2BQ99453 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.12■□□□□ 0.97
PHOX2BQ99453 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.12■□□□□ 0.97
PHOX2BQ99453 AL591742.1-201ENST00000604433 565 ntBASIC21.12■□□□□ 0.97
PHOX2BQ99453 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHOX2BQ99453 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.11■□□□□ 0.97
PHOX2BQ99453 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.11■□□□□ 0.97
PHOX2BQ99453 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.11■□□□□ 0.97
PHOX2BQ99453 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.11■□□□□ 0.97
PHOX2BQ99453 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.11■□□□□ 0.97
PHOX2BQ99453 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PHOX2BQ99453 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.11■□□□□ 0.97
PHOX2BQ99453 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHOX2BQ99453 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHOX2BQ99453 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHOX2BQ99453 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PHOX2BQ99453 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHOX2BQ99453 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHOX2BQ99453 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms