Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MS4A4EQ96PG1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 AC104187.1-201ENST00000607510 612 ntBASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MS4A4EQ96PG1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4L2-201ENST00000561772 1275 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 AC120498.10-201ENST00000621827 505 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4L6-201ENST00000626483 1275 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4L1-201ENST00000627662 1275 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4L8-201ENST00000629013 1275 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4L3-201ENST00000630187 1275 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4L7-201ENST00000630678 1275 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 DUX4L5-201ENST00000630834 1275 ntBASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A4EQ96PG1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 KRT16P2-201ENST00000414673 1423 ntBASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.45■□□□□ 0.7
MS4A4EQ96PG1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A4EQ96PG1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A4EQ96PG1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms