Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTHRC1Q96CG8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 UBE2DNL-204ENST00000602536 740 ntBASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTHRC1Q96CG8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.43■□□□□ 0.7
CTHRC1Q96CG8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 AC006015.1-201ENST00000429970 570 ntBASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 KRT18P11-201ENST00000435214 1283 ntBASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 AC243732.1-201ENST00000612648 864 ntBASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 MYCNOS-205ENST00000641950 531 ntBASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTHRC1Q96CG8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 AC137761.2-201ENST00000561729 223 ntBASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 AC145350.3-201ENST00000569033 163 ntBASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTHRC1Q96CG8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 AC245052.3-201ENST00000450182 901 ntBASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 RBM17P2-201ENST00000616397 1405 ntBASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTHRC1Q96CG8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CTHRC1Q96CG8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTHRC1Q96CG8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CTHRC1Q96CG8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CTHRC1Q96CG8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 AC022517.1-201ENST00000592429 346 ntBASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CTHRC1Q96CG8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms