Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.38■□□□□ 0.85
ATL1Q8WXF7 AL049796.1-201ENST00000565336 1766 ntBASIC20.37■□□□□ 0.85
ATL1Q8WXF7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 AC120498.10-201ENST00000621827 505 ntBASIC20.37■□□□□ 0.85
ATL1Q8WXF7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATL1Q8WXF7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 AC019069.1-201ENST00000610008 1333 ntBASIC20.36■□□□□ 0.85
ATL1Q8WXF7 AL137060.1-201ENST00000618151 2648 ntBASIC20.36■□□□□ 0.85
ATL1Q8WXF7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.36■□□□□ 0.85
ATL1Q8WXF7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 AC010141.2-201ENST00000452426 721 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4L2-201ENST00000561772 1275 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4L6-201ENST00000626483 1275 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4L1-201ENST00000627662 1275 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4L8-201ENST00000629013 1275 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4L3-201ENST00000630187 1275 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4L7-201ENST00000630678 1275 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DUX4L5-201ENST00000630834 1275 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 AC005229.4-201ENST00000610085 2198 ntBASIC20.35■□□□□ 0.85
ATL1Q8WXF7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATL1Q8WXF7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATL1Q8WXF7 AC061975.6-201ENST00000579045 1553 ntBASIC20.34■□□□□ 0.85
ATL1Q8WXF7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 AC097381.1-201ENST00000429019 1296 ntBASIC20.33■□□□□ 0.85
ATL1Q8WXF7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.33■□□□□ 0.85
ATL1Q8WXF7 AC104187.1-201ENST00000607510 612 ntBASIC20.33■□□□□ 0.85
ATL1Q8WXF7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATL1Q8WXF7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATL1Q8WXF7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATL1Q8WXF7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATL1Q8WXF7 AF106564.1-201ENST00000607058 2553 ntBASIC20.33■□□□□ 0.84
ATL1Q8WXF7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATL1Q8WXF7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms