Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RTN4IP1Q8WWV3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RTN4IP1Q8WWV3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 MIR939-201ENST00000401314 82 ntBASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 IGHV3-19-201ENST00000521488 291 ntBASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 AF213884.3-201ENST00000563833 479 ntBASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 AL031432.3-201ENST00000607698 485 ntBASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN4IP1Q8WWV3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN4IP1Q8WWV3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 AC091305.1-201ENST00000479476 895 ntBASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 RASA4CP-201ENST00000424092 1398 ntBASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN4IP1Q8WWV3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.5■□□□□ 0.39
RTN4IP1Q8WWV3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms