Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRUB1Q8WWH5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 AP005212.1-201ENST00000581547 1997 ntBASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 OR2I1P-207ENST00000453522 948 ntBASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRUB1Q8WWH5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRUB1Q8WWH5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 AC026471.1-201ENST00000564629 3026 ntBASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.1■□□□□ 0.65
TRUB1Q8WWH5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRUB1Q8WWH5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 LETM1P2-201ENST00000597330 2178 ntBASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
TRUB1Q8WWH5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRUB1Q8WWH5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRUB1Q8WWH5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms