Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSMEM1Q8WWF3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 OR7E47P-201ENST00000546390 1422 ntBASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 AC006970.2-201ENST00000450065 779 ntBASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 RAP2CP1-201ENST00000605103 478 ntBASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 AC104187.1-201ENST00000607510 612 ntBASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 AC011767.1-201ENST00000617410 1153 ntBASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSMEM1Q8WWF3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 HLA-L-209ENST00000420110 1011 ntBASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSMEM1Q8WWF3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 AP004607.7-201ENST00000527152 1677 ntBASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.23■□□□□ 0.35
SSMEM1Q8WWF3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 AC055733.4-201ENST00000638462 1354 ntBASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.22■□□□□ 0.35
SSMEM1Q8WWF3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms