Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SYNPOQ8N3V7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.31■■□□□ 1
SYNPOQ8N3V7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.31■■□□□ 1
SYNPOQ8N3V7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYNPOQ8N3V7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYNPOQ8N3V7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.3■■□□□ 1
SYNPOQ8N3V7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SYNPOQ8N3V7 AC233723.2-201ENST00000623798 2106 ntBASIC21.3■■□□□ 1
SYNPOQ8N3V7 AC073648.6-201ENST00000641589 218 ntBASIC21.3■■□□□ 1
SYNPOQ8N3V7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 AC061975.6-201ENST00000579045 1553 ntBASIC21.3■■□□□ 1
SYNPOQ8N3V7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SYNPOQ8N3V7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.3■■□□□ 1
SYNPOQ8N3V7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SYNPOQ8N3V7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SYNPOQ8N3V7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYNPOQ8N3V7 UBE2SP1-201ENST00000450587 669 ntBASIC21.29■■□□□ 1
SYNPOQ8N3V7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.29■■□□□ 1
SYNPOQ8N3V7 UNC93B4-201ENST00000505679 747 ntBASIC21.29■■□□□ 1
SYNPOQ8N3V7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SYNPOQ8N3V7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYNPOQ8N3V7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYNPOQ8N3V7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SYNPOQ8N3V7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SYNPOQ8N3V7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 AL596275.1-201ENST00000423464 877 ntBASIC21.28■■□□□ 1
SYNPOQ8N3V7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 AC087742.1-201ENST00000575880 1738 ntBASIC21.28■■□□□ 1
SYNPOQ8N3V7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.28■■□□□ 1
SYNPOQ8N3V7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SYNPOQ8N3V7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNPOQ8N3V7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.27■■□□□ 1
SYNPOQ8N3V7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SYNPOQ8N3V7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNPOQ8N3V7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.27■■□□□ 1
SYNPOQ8N3V7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.27■■□□□ 1
SYNPOQ8N3V7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.27■■□□□ 1
SYNPOQ8N3V7 CDV3P1-201ENST00000471403 739 ntBASIC21.27■■□□□ 1
SYNPOQ8N3V7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.27■■□□□ 1
SYNPOQ8N3V7 HLA-B-256ENST00000639848 1089 ntBASIC21.27■■□□□ 1
SYNPOQ8N3V7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.27■■□□□ 1
SYNPOQ8N3V7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNPOQ8N3V7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.27■□□□□ 0.99
SYNPOQ8N3V7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SYNPOQ8N3V7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
SYNPOQ8N3V7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SYNPOQ8N3V7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SYNPOQ8N3V7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 AC060766.5-201ENST00000590539 871 ntBASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 C1orf229-201ENST00000623686 2258 ntBASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPOQ8N3V7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPOQ8N3V7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms