Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SIX5Q8N196 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
SIX5Q8N196 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
SIX5Q8N196 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SIX5Q8N196 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.45■■□□□ 1.02
SIX5Q8N196 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.45■■□□□ 1.02
SIX5Q8N196 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.45■■□□□ 1.02
SIX5Q8N196 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SIX5Q8N196 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.45■■□□□ 1.02
SIX5Q8N196 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SIX5Q8N196 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
SIX5Q8N196 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.45■■□□□ 1.02
SIX5Q8N196 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIX5Q8N196 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SIX5Q8N196 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIX5Q8N196 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIX5Q8N196 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIX5Q8N196 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SIX5Q8N196 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.44■■□□□ 1.02
SIX5Q8N196 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SIX5Q8N196 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.44■■□□□ 1.02
SIX5Q8N196 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIX5Q8N196 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SIX5Q8N196 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SIX5Q8N196 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.43■■□□□ 1.02
SIX5Q8N196 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.43■■□□□ 1.02
SIX5Q8N196 AC092068.2-201ENST00000590491 1708 ntBASIC21.43■■□□□ 1.02
SIX5Q8N196 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SIX5Q8N196 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIX5Q8N196 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.42■■□□□ 1.02
SIX5Q8N196 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.42■■□□□ 1.02
SIX5Q8N196 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.42■■□□□ 1.02
SIX5Q8N196 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
SIX5Q8N196 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.42■■□□□ 1.02
SIX5Q8N196 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.42■■□□□ 1.02
SIX5Q8N196 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
SIX5Q8N196 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.42■■□□□ 1.02
SIX5Q8N196 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 FAM21FP-204ENST00000608637 956 ntBASIC21.42■■□□□ 1.02
SIX5Q8N196 AL589743.5-201ENST00000616611 1050 ntBASIC21.42■■□□□ 1.02
SIX5Q8N196 AC093323.1-202ENST00000635031 2045 ntBASIC21.42■■□□□ 1.02
SIX5Q8N196 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIX5Q8N196 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.41■■□□□ 1.02
SIX5Q8N196 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.41■■□□□ 1.02
SIX5Q8N196 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.41■■□□□ 1.02
SIX5Q8N196 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SIX5Q8N196 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.41■■□□□ 1.02
SIX5Q8N196 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.41■■□□□ 1.02
SIX5Q8N196 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SIX5Q8N196 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.41■■□□□ 1.02
SIX5Q8N196 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 BX088651.1-201ENST00000540551 451 ntBASIC21.41■■□□□ 1.02
SIX5Q8N196 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SIX5Q8N196 SOX15-203ENST00000570788 1093 ntBASIC21.41■■□□□ 1.02
SIX5Q8N196 AC069544.1-201ENST00000609399 999 ntBASIC21.41■■□□□ 1.02
SIX5Q8N196 AC100791.3-201ENST00000617619 330 ntBASIC21.41■■□□□ 1.02
SIX5Q8N196 CLDN5-201ENST00000403084 2357 ntBASIC21.41■■□□□ 1.02
SIX5Q8N196 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIX5Q8N196 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIX5Q8N196 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SIX5Q8N196 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.4■■□□□ 1.02
SIX5Q8N196 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.4■■□□□ 1.02
SIX5Q8N196 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms