Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE9Q8IYJ1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE9Q8IYJ1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPNE9Q8IYJ1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 AC123595.1-201ENST00000440769 1046 ntBASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPNE9Q8IYJ1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CPNE9Q8IYJ1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 TERF1P2-201ENST00000583350 1212 ntBASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 AC061975.6-201ENST00000579045 1553 ntBASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CPNE9Q8IYJ1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 CCDC92B-201ENST00000575506 885 ntBASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE9Q8IYJ1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE9Q8IYJ1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 KRT18P14-201ENST00000534205 1250 ntBASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE9Q8IYJ1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE9Q8IYJ1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms