Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21■□□□□ 0.95
USP45Q70EL2 AC080038.1-201ENST00000611274 1154 ntBASIC21■□□□□ 0.95
USP45Q70EL2 AC010536.3-201ENST00000620306 533 ntBASIC21■□□□□ 0.95
USP45Q70EL2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21■□□□□ 0.95
USP45Q70EL2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
USP45Q70EL2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21■□□□□ 0.95
USP45Q70EL2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP45Q70EL2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
USP45Q70EL2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP45Q70EL2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
USP45Q70EL2 Z98882.1-201ENST00000622160 2253 ntBASIC20.99■□□□□ 0.95
USP45Q70EL2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.99■□□□□ 0.95
USP45Q70EL2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.99■□□□□ 0.95
USP45Q70EL2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
USP45Q70EL2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.99■□□□□ 0.95
USP45Q70EL2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP45Q70EL2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.99■□□□□ 0.95
USP45Q70EL2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.98■□□□□ 0.95
USP45Q70EL2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.98■□□□□ 0.95
USP45Q70EL2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP45Q70EL2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP45Q70EL2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.98■□□□□ 0.95
USP45Q70EL2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP45Q70EL2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.98■□□□□ 0.95
USP45Q70EL2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
USP45Q70EL2 AC245052.3-201ENST00000450182 901 ntBASIC20.98■□□□□ 0.95
USP45Q70EL2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
USP45Q70EL2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP45Q70EL2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
USP45Q70EL2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.98■□□□□ 0.95
USP45Q70EL2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.97■□□□□ 0.95
USP45Q70EL2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.97■□□□□ 0.95
USP45Q70EL2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.97■□□□□ 0.95
USP45Q70EL2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.97■□□□□ 0.95
USP45Q70EL2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.97■□□□□ 0.95
USP45Q70EL2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
USP45Q70EL2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP45Q70EL2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.96■□□□□ 0.95
USP45Q70EL2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.96■□□□□ 0.95
USP45Q70EL2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
USP45Q70EL2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.96■□□□□ 0.95
USP45Q70EL2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
USP45Q70EL2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.96■□□□□ 0.95
USP45Q70EL2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.96■□□□□ 0.95
USP45Q70EL2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.96■□□□□ 0.95
USP45Q70EL2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.96■□□□□ 0.95
USP45Q70EL2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.96■□□□□ 0.95
USP45Q70EL2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.96■□□□□ 0.95
USP45Q70EL2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP45Q70EL2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP45Q70EL2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.95■□□□□ 0.94
USP45Q70EL2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP45Q70EL2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.95■□□□□ 0.94
USP45Q70EL2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP45Q70EL2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP45Q70EL2 TERF1P5-201ENST00000477545 1207 ntBASIC20.95■□□□□ 0.94
USP45Q70EL2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
USP45Q70EL2 AC013268.1-206ENST00000638368 961 ntBASIC20.95■□□□□ 0.94
USP45Q70EL2 AC112229.1-201ENST00000639295 961 ntBASIC20.95■□□□□ 0.94
USP45Q70EL2 AC073111.5-205ENST00000641717 521 ntBASIC20.95■□□□□ 0.94
USP45Q70EL2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP45Q70EL2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP45Q70EL2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP45Q70EL2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP45Q70EL2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
USP45Q70EL2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP45Q70EL2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP45Q70EL2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.94■□□□□ 0.94
USP45Q70EL2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
USP45Q70EL2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms