Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 HLA-B-256ENST00000639848 1089 ntBASIC17.57■□□□□ 0.4
VPS13CQ709C8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 PNMA6B-201ENST00000538162 1200 ntBASIC17.57■□□□□ 0.4
VPS13CQ709C8 C2orf69P4-201ENST00000565394 541 ntBASIC17.57■□□□□ 0.4
VPS13CQ709C8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS13CQ709C8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS13CQ709C8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 SOX15-203ENST00000570788 1093 ntBASIC17.56■□□□□ 0.4
VPS13CQ709C8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS13CQ709C8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 REXO1L12P-201ENST00000622156 912 ntBASIC17.56■□□□□ 0.4
VPS13CQ709C8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VPS13CQ709C8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 AC069544.1-201ENST00000609399 999 ntBASIC17.55■□□□□ 0.4
VPS13CQ709C8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.55■□□□□ 0.4
VPS13CQ709C8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS13CQ709C8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS13CQ709C8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS13CQ709C8 RPS2P55-201ENST00000397318 883 ntBASIC17.54■□□□□ 0.4
VPS13CQ709C8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS13CQ709C8 AC107956.1-201ENST00000494359 873 ntBASIC17.54■□□□□ 0.4
VPS13CQ709C8 AC092368.3-202ENST00000574180 1591 ntBASIC17.54■□□□□ 0.4
VPS13CQ709C8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS13CQ709C8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 AC010542.4-201ENST00000563151 1910 ntBASIC17.54■□□□□ 0.4
VPS13CQ709C8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS13CQ709C8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
VPS13CQ709C8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS13CQ709C8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS13CQ709C8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS13CQ709C8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS13CQ709C8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS13CQ709C8 AC092053.2-201ENST00000640557 1818 ntBASIC17.53■□□□□ 0.4
VPS13CQ709C8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS13CQ709C8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 AC053503.5-201ENST00000601508 636 ntBASIC17.53■□□□□ 0.4
VPS13CQ709C8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS13CQ709C8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS13CQ709C8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
VPS13CQ709C8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms