Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 AC245052.3-201ENST00000450182 901 ntBASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 AC097658.1-201ENST00000475555 843 ntBASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 AC100791.3-201ENST00000617619 330 ntBASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.9■□□□□ 0.3
C9orf139Q6ZV77 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf139Q6ZV77 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
C9orf139Q6ZV77 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
C9orf139Q6ZV77 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.89■□□□□ 0.29
C9orf139Q6ZV77 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 C1orf229-201ENST00000623686 2258 ntBASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 AC091799.1-201ENST00000422823 811 ntBASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 POU5F1P3-201ENST00000428824 1078 ntBASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 AC091874.3-201ENST00000512672 1195 ntBASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C9orf139Q6ZV77 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 CDV3P1-201ENST00000471403 739 ntBASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 RNA5SP413-201ENST00000516373 109 ntBASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 AC083880.1-201ENST00000608266 535 ntBASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
C9orf139Q6ZV77 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 ITM2C-210ENST00000620962 501 ntBASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 AC080038.3-201ENST00000623346 1952 ntBASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
C9orf139Q6ZV77 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf139Q6ZV77 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms