Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00575Q6W349 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 AC018445.3-201ENST00000624177 1945 ntBASIC13.23□□□□□ -0.29
LINC00575Q6W349 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00575Q6W349 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00575Q6W349 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00575Q6W349 MIR4449-201ENST00000578365 66 ntBASIC13.23□□□□□ -0.29
LINC00575Q6W349 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00575Q6W349 U85056.1-201ENST00000616429 682 ntBASIC13.23□□□□□ -0.29
LINC00575Q6W349 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00575Q6W349 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LINC00575Q6W349 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00575Q6W349 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00575Q6W349 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 AC009102.2-201ENST00000606772 1639 ntBASIC13.22□□□□□ -0.29
LINC00575Q6W349 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 BHLHE23-202ENST00000612929 1109 ntBASIC13.22□□□□□ -0.29
LINC00575Q6W349 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00575Q6W349 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00575Q6W349 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00575Q6W349 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00575Q6W349 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00575Q6W349 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00575Q6W349 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00575Q6W349 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00575Q6W349 AC074183.2-201ENST00000623112 922 ntBASIC13.21□□□□□ -0.29
LINC00575Q6W349 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00575Q6W349 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00575Q6W349 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.21□□□□□ -0.3
LINC00575Q6W349 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.21□□□□□ -0.3
LINC00575Q6W349 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00575Q6W349 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00575Q6W349 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC13.21□□□□□ -0.3
LINC00575Q6W349 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00575Q6W349 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 AC007225.1-201ENST00000566331 1836 ntBASIC13.2□□□□□ -0.3
LINC00575Q6W349 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 AC121338.2-201ENST00000622535 1744 ntBASIC13.2□□□□□ -0.3
LINC00575Q6W349 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 KRT18P60-201ENST00000312876 1297 ntBASIC13.2□□□□□ -0.3
LINC00575Q6W349 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 DUX4L18-201ENST00000553347 1267 ntBASIC13.2□□□□□ -0.3
LINC00575Q6W349 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00575Q6W349 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00575Q6W349 AC003102.1-202ENST00000563394 1796 ntBASIC13.2□□□□□ -0.3
LINC00575Q6W349 AL162377.1-201ENST00000618844 1793 ntBASIC13.2□□□□□ -0.3
LINC00575Q6W349 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms